Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0082 |
Symbol | |
ID | 3773799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 79265 |
End bp | 81013 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637798488 |
Product | ATPase |
Protein accession | YP_399101 |
Protein GI | 81298893 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCTCCT CAACCTCCTT GCAGAAGCAC GCCAGCTACA ACCTCCTTTG GCCTTATCTG CGGCCCCAAA CGAAGACCAT TGTTCAGGCC TTGCTCTGTA CGCTGGTCTT CACGGCATTT TGGCCGATCT TGGCTTTCTT GGCAGGCCAG ATGGTCAATC TGCTGGTACA GGGAAAAGTA TGGGAACTGG CACGGCTGGC AGCGATCACG ATCGTCGGCT TCCTCATCCA TAAAGCTGCT CAGTATGGAC AAGACTCCTT AATGGCGAAG GCGGCGCTTC AGATCGCCTA CAACCTGCGG GTCAATACCT ATCGACACAT CCAAAGCCTG AGCCTCAGCT ACTTCGAGAA GGCCAAAACT GGCGACCTCA CCTACCGGAT GACCGAGGAC ATCGATCGCG TTGGGGAAGT CGTCAATAAG GTCTTTCACG ATGCGACACC CTCGATCCTG CAGCTGATCG TCGTGCTCAG CTACATGATC TATCTGAACT GGACGCTGAC GCTGGCGATC CTAGTGATTG CGCCGATCAT GGGTTTCTTG GTCGGCTGGT TTGGGCAGCA AATGTTGGTG TTTTCGCGGC GCAGTCAGTC GCGGATCTCA GACTTATCTT CTCTGCTAAC GGAAGTCTTT AGCGGCATTC GTCTGGTGCG GGCCTTTGCT GCGGAACCCT ACGAAATCGA GCGCTTCAGC CGCGAGGCCG AGCGTAACCG TGAGGCCCGC TATCGCACGG CTTGGCTGCG GGCCATTCAA TATCCCGTCA TTGGCTTTCT GCAGGCTGCC AGCATTCTCT TCATTGTCGT GCTGGGCAGT TGGCAGATTT CCACGGGCCA GCTCAACGGG CCAAATTTGG GCAGCTATGT GGCAGCGATC GCCATGTTAA TTGACCCGAT CGTCCACCTG ATCGATAACT TCAACGAGTT CAAGCAGGGG CAGGCTTCCC TTGATCGCAT TGATGAACTG CTGAGCATTG AGCCTGCGGT TCAAGAGGAT CCCCAGTCAC GGATGCTGCC GCCGATTACC GGCAAGGTGG AATTCCGACA GGTGAGCTTC AGCTATCGCA GCGACAGTGC GCCGGTGTTG CGCCAACTCA ATCTGACGGT CGAACCAGGT GAAGCGGTTG CCTTGGTTGG GGCTTCAGGT GCGGGCAAAT CAACCCTCGT CAATCTGATC CCGCGTTTCT ACGACCCGCA GGATGGCGAA ATTTTGGTGG ATGGCATTCC CATTCGCAGT GTCACCCTCG GCAGTCTGCG GCGACAGATC GGTATCGTCC CCCAAGAGAC AATCCTGTTC TCCGGCACGA TTGCCCAGAA CATTGCCTTT GGTCAGAGGC AGTTCGATCG CGCTGCCGTG GAAGAAGCCG CACGCATTGC CAACGCCCAT CAATTCATCA GCCAAATGCC CGATGGCTAT GACACATGGG TGGGAGAGCG CGGCGTCAAC CTCTCCGGCG GTCAGCGGCA GCGGCTGGCG ATCGCCCGCG CGGTCTTGCT GGATCCACGC ATTTTAATTC TGGATGAGGC GACTTCGGCG CTTGATTCCG AGTCCGAAAC CTTGGTGCAA GAGGCCCTAG AACGGGTGAT GCAGGGACGG ACGGTCTTTA TCATTGCTCA CCGTCTGGCT ACGGTTCGTA ATGCCAGCCG CATCTTGGTG ATGGAGCGCG GCCAGATTGT TGAGGCAGGC AATCACGATG CGCTGTTGGC AGAGGCTGGC CGCTATGCGC GATACTACGC ACAGCAATTT CGTGCCTGA
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Protein sequence | MFSSTSLQKH ASYNLLWPYL RPQTKTIVQA LLCTLVFTAF WPILAFLAGQ MVNLLVQGKV WELARLAAIT IVGFLIHKAA QYGQDSLMAK AALQIAYNLR VNTYRHIQSL SLSYFEKAKT GDLTYRMTED IDRVGEVVNK VFHDATPSIL QLIVVLSYMI YLNWTLTLAI LVIAPIMGFL VGWFGQQMLV FSRRSQSRIS DLSSLLTEVF SGIRLVRAFA AEPYEIERFS REAERNREAR YRTAWLRAIQ YPVIGFLQAA SILFIVVLGS WQISTGQLNG PNLGSYVAAI AMLIDPIVHL IDNFNEFKQG QASLDRIDEL LSIEPAVQED PQSRMLPPIT GKVEFRQVSF SYRSDSAPVL RQLNLTVEPG EAVALVGASG AGKSTLVNLI PRFYDPQDGE ILVDGIPIRS VTLGSLRRQI GIVPQETILF SGTIAQNIAF GQRQFDRAAV EEAARIANAH QFISQMPDGY DTWVGERGVN LSGGQRQRLA IARAVLLDPR ILILDEATSA LDSESETLVQ EALERVMQGR TVFIIAHRLA TVRNASRILV MERGQIVEAG NHDALLAEAG RYARYYAQQF RA
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