Gene Synpcc7942_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0082 
Symbol 
ID3773799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp79265 
End bp81013 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content57% 
IMG OID637798488 
ProductATPase 
Protein accessionYP_399101 
Protein GI81298893 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTCCT CAACCTCCTT GCAGAAGCAC GCCAGCTACA ACCTCCTTTG GCCTTATCTG 
CGGCCCCAAA CGAAGACCAT TGTTCAGGCC TTGCTCTGTA CGCTGGTCTT CACGGCATTT
TGGCCGATCT TGGCTTTCTT GGCAGGCCAG ATGGTCAATC TGCTGGTACA GGGAAAAGTA
TGGGAACTGG CACGGCTGGC AGCGATCACG ATCGTCGGCT TCCTCATCCA TAAAGCTGCT
CAGTATGGAC AAGACTCCTT AATGGCGAAG GCGGCGCTTC AGATCGCCTA CAACCTGCGG
GTCAATACCT ATCGACACAT CCAAAGCCTG AGCCTCAGCT ACTTCGAGAA GGCCAAAACT
GGCGACCTCA CCTACCGGAT GACCGAGGAC ATCGATCGCG TTGGGGAAGT CGTCAATAAG
GTCTTTCACG ATGCGACACC CTCGATCCTG CAGCTGATCG TCGTGCTCAG CTACATGATC
TATCTGAACT GGACGCTGAC GCTGGCGATC CTAGTGATTG CGCCGATCAT GGGTTTCTTG
GTCGGCTGGT TTGGGCAGCA AATGTTGGTG TTTTCGCGGC GCAGTCAGTC GCGGATCTCA
GACTTATCTT CTCTGCTAAC GGAAGTCTTT AGCGGCATTC GTCTGGTGCG GGCCTTTGCT
GCGGAACCCT ACGAAATCGA GCGCTTCAGC CGCGAGGCCG AGCGTAACCG TGAGGCCCGC
TATCGCACGG CTTGGCTGCG GGCCATTCAA TATCCCGTCA TTGGCTTTCT GCAGGCTGCC
AGCATTCTCT TCATTGTCGT GCTGGGCAGT TGGCAGATTT CCACGGGCCA GCTCAACGGG
CCAAATTTGG GCAGCTATGT GGCAGCGATC GCCATGTTAA TTGACCCGAT CGTCCACCTG
ATCGATAACT TCAACGAGTT CAAGCAGGGG CAGGCTTCCC TTGATCGCAT TGATGAACTG
CTGAGCATTG AGCCTGCGGT TCAAGAGGAT CCCCAGTCAC GGATGCTGCC GCCGATTACC
GGCAAGGTGG AATTCCGACA GGTGAGCTTC AGCTATCGCA GCGACAGTGC GCCGGTGTTG
CGCCAACTCA ATCTGACGGT CGAACCAGGT GAAGCGGTTG CCTTGGTTGG GGCTTCAGGT
GCGGGCAAAT CAACCCTCGT CAATCTGATC CCGCGTTTCT ACGACCCGCA GGATGGCGAA
ATTTTGGTGG ATGGCATTCC CATTCGCAGT GTCACCCTCG GCAGTCTGCG GCGACAGATC
GGTATCGTCC CCCAAGAGAC AATCCTGTTC TCCGGCACGA TTGCCCAGAA CATTGCCTTT
GGTCAGAGGC AGTTCGATCG CGCTGCCGTG GAAGAAGCCG CACGCATTGC CAACGCCCAT
CAATTCATCA GCCAAATGCC CGATGGCTAT GACACATGGG TGGGAGAGCG CGGCGTCAAC
CTCTCCGGCG GTCAGCGGCA GCGGCTGGCG ATCGCCCGCG CGGTCTTGCT GGATCCACGC
ATTTTAATTC TGGATGAGGC GACTTCGGCG CTTGATTCCG AGTCCGAAAC CTTGGTGCAA
GAGGCCCTAG AACGGGTGAT GCAGGGACGG ACGGTCTTTA TCATTGCTCA CCGTCTGGCT
ACGGTTCGTA ATGCCAGCCG CATCTTGGTG ATGGAGCGCG GCCAGATTGT TGAGGCAGGC
AATCACGATG CGCTGTTGGC AGAGGCTGGC CGCTATGCGC GATACTACGC ACAGCAATTT
CGTGCCTGA
 
Protein sequence
MFSSTSLQKH ASYNLLWPYL RPQTKTIVQA LLCTLVFTAF WPILAFLAGQ MVNLLVQGKV 
WELARLAAIT IVGFLIHKAA QYGQDSLMAK AALQIAYNLR VNTYRHIQSL SLSYFEKAKT
GDLTYRMTED IDRVGEVVNK VFHDATPSIL QLIVVLSYMI YLNWTLTLAI LVIAPIMGFL
VGWFGQQMLV FSRRSQSRIS DLSSLLTEVF SGIRLVRAFA AEPYEIERFS REAERNREAR
YRTAWLRAIQ YPVIGFLQAA SILFIVVLGS WQISTGQLNG PNLGSYVAAI AMLIDPIVHL
IDNFNEFKQG QASLDRIDEL LSIEPAVQED PQSRMLPPIT GKVEFRQVSF SYRSDSAPVL
RQLNLTVEPG EAVALVGASG AGKSTLVNLI PRFYDPQDGE ILVDGIPIRS VTLGSLRRQI
GIVPQETILF SGTIAQNIAF GQRQFDRAAV EEAARIANAH QFISQMPDGY DTWVGERGVN
LSGGQRQRLA IARAVLLDPR ILILDEATSA LDSESETLVQ EALERVMQGR TVFIIAHRLA
TVRNASRILV MERGQIVEAG NHDALLAEAG RYARYYAQQF RA