| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0080 |
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| Symbol | |
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| ID | 3773797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 77648 |
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| End bp | 78871 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637798486 |
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| Product | ABC transporter permease |
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| Protein accession | YP_399099 |
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| Protein GI | 81298891 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG ATTGGTCTGA AAGCCTCTCA ATGGCGGTCA AAACTCTGCG AGCCAATCGG
CTGCGCAGCG CTCTGACCAT GCTGGGCATC ATCATCGGCA ACGCCTCGGT GATCACGATG
GTGGGTGTTG GGCAAGGGGC ACAACGCCTA GCATCAGAGC AATTCGAGTC CTTGGGGCCG
AATGTACTGT TCATCGTGCC GGGCAACCAA GATACGCGGC GCGGCGGCTT GGATATTCCC
AAAACCTTGG TTTTGGCTGA TGCCGTGGCG ATCGCGACTC AAGTACCAAC CGCCGGCGAA
GTCGCCCCCC AAGTCAGTAC CCGCCAGTTG GTGACCTACC AAGGCGAATC GAGCACCACC
CAAGTCTTTG GCGTGACGCC TAGCTTCTTG ACGGTGCGGA GTTTTAGCGT GGCGCGGGGC
CGCTTCTTTA GTGATCTCGA TCTCAGTCGG GCGGAACAGG TCGCCGTTCT GGGGAGCGAC
CTAGCGATAA AGCTGTTTGG CGTCCAAAAT CCCGTCGGGG CCAGCATCCG CATCAAGGGA
GCCTCCTTCC GCGTCATTGG CGTGATGGAA CCCAAGGGTA GCTTTTTGGG CAATAACCAA
GATGATGCGG TCTACTTGCC CTTGACCACG GTTTCCAGTC GCATTCTCGG CACCACTTCG
CCCTACGGCA TTGAAGTCAG CTTTATCTCC GTCGCGGCCA AGGATGCCAA CAGCATTGAT
GCGGCACAGT TTCAAATCAC CAACCTGCTA CGGCAGCGGC ACCGGATTAT CCGCGAGGAT
GATTTTGAGG TGCGATCGCA AAAGGATGTC TTGACGATTG TGGGCACCGT CACCAATGGC
CTCACCCTGA TGCTGTCTGC GATCGCCGGT ATTTCCCTGT TGGTCGGCGG CATCGGCATC
ATGAACATCA TGCTGGTCTC CGTCTCGGAG CGCACCCAAG AAATTGGCCT GCGCAAAGCG
ATCGGGGCGA CCCAAAAAGA CATCCTCAAT CAGTTCATGA TCGAGGCCGT GATTTTGGCC
CTGCTAGGCG GTGCGATCGG CACTGGGTTG GGCATTACTG GCGTCACTGC GATCGCCCTA
CTTACCCCGC TCAAAGCCGG CGTTTCTCCC GTGGCGATCG CGATCACCGT CACGATTTCC
AGCGGTATCG GCCTGTTCTT CGGCGTCGTG CCAGCCCGCC AAGCCGCACG TCTCGACCCG
ATCGTGGCGC TACGCAGCGC CTAG
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| Protein sequence | MSVDWSESLS MAVKTLRANR LRSALTMLGI IIGNASVITM VGVGQGAQRL ASEQFESLGP
NVLFIVPGNQ DTRRGGLDIP KTLVLADAVA IATQVPTAGE VAPQVSTRQL VTYQGESSTT
QVFGVTPSFL TVRSFSVARG RFFSDLDLSR AEQVAVLGSD LAIKLFGVQN PVGASIRIKG
ASFRVIGVME PKGSFLGNNQ DDAVYLPLTT VSSRILGTTS PYGIEVSFIS VAAKDANSID
AAQFQITNLL RQRHRIIRED DFEVRSQKDV LTIVGTVTNG LTLMLSAIAG ISLLVGGIGI
MNIMLVSVSE RTQEIGLRKA IGATQKDILN QFMIEAVILA LLGGAIGTGL GITGVTAIAL
LTPLKAGVSP VAIAITVTIS SGIGLFFGVV PARQAARLDP IVALRSA
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