Gene Synpcc7942_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0076 
Symbol 
ID3773793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp75091 
End bp75852 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content51% 
IMG OID637798482 
Productextracellular solute-binding protein 
Protein accessionYP_399095 
Protein GI81298887 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.717965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTT CGCCCTTCAC GGCTGGCCTG CTGACGCTGG GCCTGGGGCT GAGCTACAGT 
GCTGCAGCCC TAGCGCAAAC GCTCCGCGCC CTGACGACGG ATAACTATCC GCCCTTTGAG
TTTCGCATCG AAGAAACTAC CGATCGCCCT GGGGTATACG GCTTTGATAT TGAACTCGCC
GAAACGATCG CCCGCAATCT AGGGTTAAAA ATTCAGTTTC AGGTGGGTTC CTTCGAACAG
CTCTTGCCGA ATTTGATGGC TGGACAGGGC GATCTAGCGA TCGCGGCGAT TTCAATTACC
CCTGAGCGAG CCCAGCGGGT AGACTTCTCG GAACCCTATT TCGAAGCCCA AGACAGCTTA
GTGACGCTTA ATTCGCGATT GCTGCCGGCC GATCAAAATC TGTCTGGATT GAGACTGGGC
TATCTCCAAG GGACGGTCCA GGCCCAACGG GCAGCCCAGC TCAAAACTCG TTATCCAACT
TTGCAAACTA AAAGTTATGT TGATGTCACG GCTTTGTTAA AAGCATTAAC AACACGTGAA
GTTGATATCG CCCTTGTGGA ATCTGTGGTT GCAGCAATTT TCGCCCAAGA TAATGCTCAG
CTTGTTGTTC AAAAACTGAA TGGTGCAACG CAAGAACGCT ACGCGATCGC CTTTCCCAAA
GGGTCGCCCT ACCGTGATCG ATTCAATCGT GAAATCCGTC GCTTAAGAGA CAGTGGTGAG
TTAACTTTAA TGCTAAGGCG CTGGTTTGCT GCCCAACAAT AA
 
Protein sequence
MRLSPFTAGL LTLGLGLSYS AAALAQTLRA LTTDNYPPFE FRIEETTDRP GVYGFDIELA 
ETIARNLGLK IQFQVGSFEQ LLPNLMAGQG DLAIAAISIT PERAQRVDFS EPYFEAQDSL
VTLNSRLLPA DQNLSGLRLG YLQGTVQAQR AAQLKTRYPT LQTKSYVDVT ALLKALTTRE
VDIALVESVV AAIFAQDNAQ LVVQKLNGAT QERYAIAFPK GSPYRDRFNR EIRRLRDSGE
LTLMLRRWFA AQQ