Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0076 |
Symbol | |
ID | 3773793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 75091 |
End bp | 75852 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637798482 |
Product | extracellular solute-binding protein |
Protein accession | YP_399095 |
Protein GI | 81298887 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.717965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTTT CGCCCTTCAC GGCTGGCCTG CTGACGCTGG GCCTGGGGCT GAGCTACAGT GCTGCAGCCC TAGCGCAAAC GCTCCGCGCC CTGACGACGG ATAACTATCC GCCCTTTGAG TTTCGCATCG AAGAAACTAC CGATCGCCCT GGGGTATACG GCTTTGATAT TGAACTCGCC GAAACGATCG CCCGCAATCT AGGGTTAAAA ATTCAGTTTC AGGTGGGTTC CTTCGAACAG CTCTTGCCGA ATTTGATGGC TGGACAGGGC GATCTAGCGA TCGCGGCGAT TTCAATTACC CCTGAGCGAG CCCAGCGGGT AGACTTCTCG GAACCCTATT TCGAAGCCCA AGACAGCTTA GTGACGCTTA ATTCGCGATT GCTGCCGGCC GATCAAAATC TGTCTGGATT GAGACTGGGC TATCTCCAAG GGACGGTCCA GGCCCAACGG GCAGCCCAGC TCAAAACTCG TTATCCAACT TTGCAAACTA AAAGTTATGT TGATGTCACG GCTTTGTTAA AAGCATTAAC AACACGTGAA GTTGATATCG CCCTTGTGGA ATCTGTGGTT GCAGCAATTT TCGCCCAAGA TAATGCTCAG CTTGTTGTTC AAAAACTGAA TGGTGCAACG CAAGAACGCT ACGCGATCGC CTTTCCCAAA GGGTCGCCCT ACCGTGATCG ATTCAATCGT GAAATCCGTC GCTTAAGAGA CAGTGGTGAG TTAACTTTAA TGCTAAGGCG CTGGTTTGCT GCCCAACAAT AA
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Protein sequence | MRLSPFTAGL LTLGLGLSYS AAALAQTLRA LTTDNYPPFE FRIEETTDRP GVYGFDIELA ETIARNLGLK IQFQVGSFEQ LLPNLMAGQG DLAIAAISIT PERAQRVDFS EPYFEAQDSL VTLNSRLLPA DQNLSGLRLG YLQGTVQAQR AAQLKTRYPT LQTKSYVDVT ALLKALTTRE VDIALVESVV AAIFAQDNAQ LVVQKLNGAT QERYAIAFPK GSPYRDRFNR EIRRLRDSGE LTLMLRRWFA AQQ
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