Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0073 |
Symbol | |
ID | 3773790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 72000 |
End bp | 73196 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798479 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_399092 |
Protein GI | 81298884 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAA AAGCTTTTAA GCGGGCCTTG CACCAGTCCG ATCGCTATAA CCGCAAAGGC TTTGGCAAAA CCACCGATGT CTCGGGCGCT CTTGAGTCGG CCTATCAAAG CGACTTGATT CAAAGCTTGC GCCAGAATGG CTACCGTCTG CAGCGTGGCG AAATCACCAT TCGCCTCGCC GAAGCTTTTG GCTTTTGCTG GGGCGTAGAG CGAGCCGTCG CGATCGCCTA CGAAACGCGT CAGCACTTTC CCCAAGAGCG GATCTGGATT ACCAACGAGA TCATCCACAA TCCCTCGGTC AACCAGCATC TACGCGAGAT GAGCGTCGAG TTTATTCCCT GTGAGCGGGG CGAGAAGGAT TTTTCCGTCG TCGATCGCGG TGATGTCGTG ATTCTGCCGG CCTTTGGGGC CAGCGTGCAG GAAATGCAGC TGCTCGATGA GAAAGGCTGC CATATCGTCG ACACCACCTG CCCTTGGGTT TCCAAGGTCT GGAACACCGT CGAAAAACAT AAGCGCGGTG CTCACACTTC AATCATTCAC GGCAAGTACA ACCACGAAGA GACGGTCGCC ACCAGCTCCT TTGCCGAAAC TTATCTGGTT GTGCTGAATC TGGAGCAAGC GCAGTACGTC TGCGACTACA TCCTTAACGG TGGCGATCGC GACGAGTTTA TGACGCGCTT TGGCAAGGCT TGCTCGGCCG GTTTTGACCC CGATCGCGAT CTGGAGCGGA TCGGCATTGC CAACCAGACA ACGATGTTGA AGAGCGAAAC CGAAGCAATC GGCAAACTAT TTGAACGGAC GCTGCTGAAG AAGTACGGCC CCCAAGCGCT CAACGATCAC TTTTTGGCCT TCAACACCAT CTGCGATGCC ACCCAAGAGC GCCAAGACGC GATGTTCCAA CTGGTTGAGG AACCGCTGGA TTTGATCGTG GTGATCGGTG GCTTTAACTC CTCCAACACC ACTCACTTGC AAGAAATTGC GATCGAGCGC CAGATTCCCT CCTTCCATAT CGACGCGGCA GAACGGATTG GCCCCGGCAA CCGGATCGAG CACAAACCGC TCCACACGGA CCTGACCACG ACAGAGCCCT GGCTACCGGC GGGCCCGCTG ACCATTGGCA TCACCTCCGG GGCTTCAACC CCCGACAAAG TGGTGGAGGA CGTGATTGAG CGACTCTTTG ATCTGCAGCG GTCCTAG
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Protein sequence | MDTKAFKRAL HQSDRYNRKG FGKTTDVSGA LESAYQSDLI QSLRQNGYRL QRGEITIRLA EAFGFCWGVE RAVAIAYETR QHFPQERIWI TNEIIHNPSV NQHLREMSVE FIPCERGEKD FSVVDRGDVV ILPAFGASVQ EMQLLDEKGC HIVDTTCPWV SKVWNTVEKH KRGAHTSIIH GKYNHEETVA TSSFAETYLV VLNLEQAQYV CDYILNGGDR DEFMTRFGKA CSAGFDPDRD LERIGIANQT TMLKSETEAI GKLFERTLLK KYGPQALNDH FLAFNTICDA TQERQDAMFQ LVEEPLDLIV VIGGFNSSNT THLQEIAIER QIPSFHIDAA ERIGPGNRIE HKPLHTDLTT TEPWLPAGPL TIGITSGAST PDKVVEDVIE RLFDLQRS
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