Gene Synpcc7942_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0072 
Symbol 
ID3773789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp71307 
End bp71960 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content59% 
IMG OID637798478 
Producthypothetical protein 
Protein accessionYP_399091 
Protein GI81298883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.939584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTCT CTGCTTTTGT CTTGCTGCTG TGTCGCCGCG CGATCGTGAC TCTCGACTCC 
ACCCCCGCCT TTAGTACCGA TCCCGAACTG ATCTGCTTTA GCAGTCGGTT TCAGGACGAG
ATGGAGATGT ACGCTCCGGC AGAGGTCGTC GCTCACTATC TCGATCGCCA CGAGGAATGG
TTCCGGCGCT GCGCCGAACC GATGGCCACT ACCTCGATCG GCAAGGATGC CTACGCGATC
GTGTTGGGGC GCTATGGATC TCTGGGCTTT GAGGTCGAGC CGCAGATTGG CCTTGAGCTA
TTACCCGCTG ATCAAGGGGT CTACCGGATT TGCACTGTGC CGGTACCGGG CTATGAGTCC
CAAGGCTATC AAGTCGATTT TCAGGCCTCG CTCAGCCTCG ATCGCCTCAC CCACGAAACC
GAAGCACCCG TCACCGAAGC GACCGCAGTG GCTTGGGATC TACTGCTGAC CGTGGGGATT
CGCCTGCCGC GCTTTATCCA CGTGCTGCCC CAGAAGCTGG TGCACAGCAC CGGTGACCAT
CTGTTGCGGC AAATTGTGCG CCAGACCTCA CGCCGCTTGA CGCACCGCGT TCAAGAAGAC
TTTCATCAGC AACTGAATTT GCCGCTGCCG CCCCGTCGTC ACGCGCGTTT CTGA
 
Protein sequence
MTVSAFVLLL CRRAIVTLDS TPAFSTDPEL ICFSSRFQDE MEMYAPAEVV AHYLDRHEEW 
FRRCAEPMAT TSIGKDAYAI VLGRYGSLGF EVEPQIGLEL LPADQGVYRI CTVPVPGYES
QGYQVDFQAS LSLDRLTHET EAPVTEATAV AWDLLLTVGI RLPRFIHVLP QKLVHSTGDH
LLRQIVRQTS RRLTHRVQED FHQQLNLPLP PRRHARF