Gene Synpcc7942_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0065 
SymbolinfC 
ID3773782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp64987 
End bp65541 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content53% 
IMG OID637798471 
Producttranslation initiation factor IF-3 
Protein accessionYP_399084 
Protein GI81298876 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAC CTCCCCAACC GAACAGCGCT CGCAACCTTC GCAATCTCCC CCAGATCAAC 
GAACGCATTC GCTTCCCGAA AATTCGTGTC GTCGATACTG ATGGGGCCCA ACTCGGAATT
TTGACCCCTG CAGAAGCGCT ACGGATTGCC GAGGAGAAAG AACTCGATTT AGTACTGGTC
AGTGATAAGG CCGACCCACC GGTTTGCCGG ATTATGGATT ACGGCAAGTA TAAATTTGAG
CAAGAAAAAC GCGCTCGAGA AGCGCGCAAG AAGCAGCATA ACGTCGAAGT TAAAGAAGTG
AAGATGCGCT ACAAGATCGA CGAGCACGAC TATCAAGTGC GCGTCAATCA GGCTCAGCGC
TTCCTCAAAG CCGGCGACAA AGTCAAAGCC ACGATTACTT TCCGGGGGCG TGAAATTCAG
CACACGGACT TGGCTCAGCA GTTGTTGATG CGCCTTGCCA GCGATCTCAA GGAGCTGGGC
GAAGTCCAGC AAGCACCGAA GAAAGAAGGC CGCAACATGA TGATGATGCT CGGGCCGAAG
AAAGCGGGTA GCTAG
 
Protein sequence
MALPPQPNSA RNLRNLPQIN ERIRFPKIRV VDTDGAQLGI LTPAEALRIA EEKELDLVLV 
SDKADPPVCR IMDYGKYKFE QEKRAREARK KQHNVEVKEV KMRYKIDEHD YQVRVNQAQR
FLKAGDKVKA TITFRGREIQ HTDLAQQLLM RLASDLKELG EVQQAPKKEG RNMMMMLGPK
KAGS