Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0058 |
Symbol | |
ID | 3773775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 60301 |
End bp | 60846 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637798464 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_399077 |
Protein GI | 81298869 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0432137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACTG AGTTACGAGC AACGGCGATC GCAGGCGTGC TGGAACTCAT TAGTCAGCCT TTTCAGGATC ATCGAGGTGC TTTTCTCAAT GCTTTTCGGG AACAAGAGCC TGCGTTTGCA GAAGCTTGGG GAGACCGCAG GATTGCCCAA GTGAATCTGA GCCGAACTGA CAGAGTTGGA GCGATTCGGG GGCTACATTT GCAAGCAGCA CCTCACAGTG AAGCAAAGCT CGTTCGTTGT CTACGAGGAC GGGTGTGGGA TGTTGCAGTT GATCTGCGGC AGGATTCTGC AACCTATGGC CAATGGCAAG CAGTAGAACT ATCTCCTGAG CAAGCTAATG CACTACTGAT TCCTGAAGGC TGTGCTCATG GTTTCCAGGT GCTCGAAGCC AATAGCGAAT TACTCTATCT GCATTCTGGG ACTTGGGTAC CAGAAGCCGA GACGGGCATT CGTTGGGACG ATCCTCAACT GGCGATCGCT TGGCCGCTGC CGATGTCTGA ACTAAGCGAT CGCGATCGCG CTTTACCGTT TCTCTCGGGA TTATGA
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Protein sequence | MPTELRATAI AGVLELISQP FQDHRGAFLN AFREQEPAFA EAWGDRRIAQ VNLSRTDRVG AIRGLHLQAA PHSEAKLVRC LRGRVWDVAV DLRQDSATYG QWQAVELSPE QANALLIPEG CAHGFQVLEA NSELLYLHSG TWVPEAETGI RWDDPQLAIA WPLPMSELSD RDRALPFLSG L
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