Gene Synpcc7942_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0056 
Symbol 
ID3775769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp57941 
End bp59068 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content43% 
IMG OID637798462 
Productperosamine synthetase 
Protein accessionYP_399075 
Protein GI81298867 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0267366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC AATCCTATCG GAAAATTCCT TACACCAAGC CTTCAATTAC TGAGCTGGAG 
ATTCAATATG CAACTGATGC AGCCCGAAAC GGCTGGGGTG AACATTGCTA TGACTACATC
ATCCGCTTTG AAGAAGCATT TAAACAACAC CTAGGTGTGC AATATGCCAT TGCAACCAGT
AGCTGTACTG GTGCTTTGCA CATGGGTATG CATGCTTTAG GGATTGGTCC TGGTGATGAG
GTGATACTGG CCGATACGAA TTGGATAGCT ACTGCAGCTC CAATTATTCA TCTCGGGGCT
ATACCAGTCT TTGTGGATAT TTTGCCGGAT AGTTGGTGTT TAGATCCTGA GCAAGTTCAA
GCTGCTATTA CACCTAAGAC AAAGGCAATC ATAGCAGTGC ATTTATATGG AAATCTTTGT
GAGATGGATG CTTTGCTGGC AATCGGAGAG CGATACAGCA TTCCTGTTAT TGAAGATGCA
GCCGAGGCAA TTGGGTCGGT CTATCACGGT AAGCGGGCAG GTAGCATGGG TCGCTTCGGA
GCATTCTCAT TTCATGGTAC CAAGACCATT ACAACTGGTG AAGGCGGGAT GTTTGTCACC
AATGATCCGG AACTATATGA ACATGTTCTA ACGCTTTCTA ATCATGGAAG AGCTCGCGGG
CAGACTAAGC AATTTTGGCC TGACATGGTC GGCTTTAAGT ACAAAATGAG TAATATCCAA
GCTGCAATTG GCTATGCTCA AATGCAACGC ATCGAGATTC TTATACATAT GAAACGTAAA
ATCTTTTCGA TGTATCAGAA CTATCTTAAG GATCTCCCAG TTCAAATGAA TCATGAGCCT
AGAGGCTGTA CGAATGGGTA CTGGATGCCA ACATTTGTGG TTAACGAAAA AGTTTCTTTT
AATCGCAATA AGTTGATTAG CAAGCTGAAA TCAAATGGGG TGGATGCTAG GGTGTTTTTC
TGGCCTCTTA GCTCAACATC AACCGGAGGC CGTAAAGCCT TAGATAAGCC TTACCTTTCA
GAAAGCATTC ATCTACATGC ACTAAATCTT CCTTCTCACT ACCAACTTAG CAATGAAGAA
AGTATGTTTA TTTGCACTCT TATAAAGAAT ACATCCTTTT CTGGGTAA
 
Protein sequence
MAKQSYRKIP YTKPSITELE IQYATDAARN GWGEHCYDYI IRFEEAFKQH LGVQYAIATS 
SCTGALHMGM HALGIGPGDE VILADTNWIA TAAPIIHLGA IPVFVDILPD SWCLDPEQVQ
AAITPKTKAI IAVHLYGNLC EMDALLAIGE RYSIPVIEDA AEAIGSVYHG KRAGSMGRFG
AFSFHGTKTI TTGEGGMFVT NDPELYEHVL TLSNHGRARG QTKQFWPDMV GFKYKMSNIQ
AAIGYAQMQR IEILIHMKRK IFSMYQNYLK DLPVQMNHEP RGCTNGYWMP TFVVNEKVSF
NRNKLISKLK SNGVDARVFF WPLSSTSTGG RKALDKPYLS ESIHLHALNL PSHYQLSNEE
SMFICTLIKN TSFSG