Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0056 |
Symbol | |
ID | 3775769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 57941 |
End bp | 59068 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637798462 |
Product | perosamine synthetase |
Protein accession | YP_399075 |
Protein GI | 81298867 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0267366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC AATCCTATCG GAAAATTCCT TACACCAAGC CTTCAATTAC TGAGCTGGAG ATTCAATATG CAACTGATGC AGCCCGAAAC GGCTGGGGTG AACATTGCTA TGACTACATC ATCCGCTTTG AAGAAGCATT TAAACAACAC CTAGGTGTGC AATATGCCAT TGCAACCAGT AGCTGTACTG GTGCTTTGCA CATGGGTATG CATGCTTTAG GGATTGGTCC TGGTGATGAG GTGATACTGG CCGATACGAA TTGGATAGCT ACTGCAGCTC CAATTATTCA TCTCGGGGCT ATACCAGTCT TTGTGGATAT TTTGCCGGAT AGTTGGTGTT TAGATCCTGA GCAAGTTCAA GCTGCTATTA CACCTAAGAC AAAGGCAATC ATAGCAGTGC ATTTATATGG AAATCTTTGT GAGATGGATG CTTTGCTGGC AATCGGAGAG CGATACAGCA TTCCTGTTAT TGAAGATGCA GCCGAGGCAA TTGGGTCGGT CTATCACGGT AAGCGGGCAG GTAGCATGGG TCGCTTCGGA GCATTCTCAT TTCATGGTAC CAAGACCATT ACAACTGGTG AAGGCGGGAT GTTTGTCACC AATGATCCGG AACTATATGA ACATGTTCTA ACGCTTTCTA ATCATGGAAG AGCTCGCGGG CAGACTAAGC AATTTTGGCC TGACATGGTC GGCTTTAAGT ACAAAATGAG TAATATCCAA GCTGCAATTG GCTATGCTCA AATGCAACGC ATCGAGATTC TTATACATAT GAAACGTAAA ATCTTTTCGA TGTATCAGAA CTATCTTAAG GATCTCCCAG TTCAAATGAA TCATGAGCCT AGAGGCTGTA CGAATGGGTA CTGGATGCCA ACATTTGTGG TTAACGAAAA AGTTTCTTTT AATCGCAATA AGTTGATTAG CAAGCTGAAA TCAAATGGGG TGGATGCTAG GGTGTTTTTC TGGCCTCTTA GCTCAACATC AACCGGAGGC CGTAAAGCCT TAGATAAGCC TTACCTTTCA GAAAGCATTC ATCTACATGC ACTAAATCTT CCTTCTCACT ACCAACTTAG CAATGAAGAA AGTATGTTTA TTTGCACTCT TATAAAGAAT ACATCCTTTT CTGGGTAA
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Protein sequence | MAKQSYRKIP YTKPSITELE IQYATDAARN GWGEHCYDYI IRFEEAFKQH LGVQYAIATS SCTGALHMGM HALGIGPGDE VILADTNWIA TAAPIIHLGA IPVFVDILPD SWCLDPEQVQ AAITPKTKAI IAVHLYGNLC EMDALLAIGE RYSIPVIEDA AEAIGSVYHG KRAGSMGRFG AFSFHGTKTI TTGEGGMFVT NDPELYEHVL TLSNHGRARG QTKQFWPDMV GFKYKMSNIQ AAIGYAQMQR IEILIHMKRK IFSMYQNYLK DLPVQMNHEP RGCTNGYWMP TFVVNEKVSF NRNKLISKLK SNGVDARVFF WPLSSTSTGG RKALDKPYLS ESIHLHALNL PSHYQLSNEE SMFICTLIKN TSFSG
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