Gene Synpcc7942_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0046 
Symbol 
ID3775759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp45164 
End bp46507 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content52% 
IMG OID637798452 
Productubiquinone/menaquinone biosynthesis methylase-like protein 
Protein accessionYP_399065 
Protein GI81298857 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.404725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAC TGTCATCTGA GGCTTTGGAA CGGATCCGTG CGCAGTTTGA CTATGGGCCC 
TATCCACGGG TGCCGTTGGA GGCAACGCCC AAGGAAAACT ATGGGGCGCT GGCGATTCAC
GATATTCGTT CGGCTTTCTA TCGGCGCGAT CGCAGTCTGA AAGCAACCGA AGGCGCTTGC
ATTCTAGATG TGGGTTGTGG CAGCGGCTAC AAGACGTTGA TGCTGGCGCT AGCCAATCCA
GGCGCTGAAA TTATTGGGGT GGATCTATCG CTGAAGTCGG TGGAGCTAGC GCAGGAGCGA
CTCAAGTTTC AGGGCTTCCC CGAAGTCAAG TTCTATGCGC TGGGGCTGGA TGAGATTGGT
CAGCTCGAGA TCGCATTTGA CTATATCAAT TGTGATGAGC TGCTCTATTT TTTTGATGAT
CCTGCAGCAG CGCTGGGGCA AATGAAAGCG GTGCTAAAGC CTGATGGGAT TATTCGCGCC
AATTTACACT CTAAGAATCA ACGAATTGCT CATTACCGCT TACAGGAACT GTTCAAGTTT
CTAGGATTTC TGGATGGCAA TCCAGAGGCG GCAGAAATGG AAGCAGTGAC AGAGTTAATG
AATGCGCTGC AACCAGGGGT TTTGAGTCGG GCTGCGGTCT GGAACCTGCC CCTACAACTG
CAAAAAGAAG AGAAACAAGA TGAACTCGAA CAATGGCTAT TAGCAAATCT GTTGTTGCAG
GCGGATAAGG GTTATGGCGT TCCAGACCTG CGGCAGTATT TGGAGACTGC GGGGCTGGAA
TTTTTGGGTA TGGTGCAAGC CCCGCTGTGG CGGCTGAGTG AGTTGTTTGG CGATCGCGAT
CAAATTCCGG CGTTTTGGGC ATTAGGCATC CAGGAAGCGA GTTTGCTGGA TCAGGCTTAT
TTGTACGACC TGTTGCATCC GGTCAATCGC CTGTTTGATT TCTGGTGTAG TCTGCAGCCG
TTAGCCCCTA CCCAAGCTTG GGAGAATTTA CCTCTAGAGC AACGGTTGGG GCTAAAGGTT
CAGTTGCATC CTCAGTTGGC AACATCGGGG ATTGAGCAGC AGTTGCAGGA GAAGCTGAAG
TTGCGAGAGC GCTTTAGTTT GGCGCGGGCG TTGCATGGGG AGTTTTTGGG GCTGTTGACC
TATGAGCCGC TGTTTGGGGC GTTGATTAAG CCCCTGTTTG AGAAGGTGCT GTCTGTGCAG
GAGTTGGTAC AGCGCTTCCA ACAGTTGCAA CCGTTGGATT ATGTGACGGG TGAGCTTTGG
GAGTTGGAAG CAGTAGCGGA GTTGGTTTGG AATTTCTTAG CTGAGTTAGA ACGCGATCAG
TGCCTGTTTC TGACTCAGGC TTGA
 
Protein sequence
MSSLSSEALE RIRAQFDYGP YPRVPLEATP KENYGALAIH DIRSAFYRRD RSLKATEGAC 
ILDVGCGSGY KTLMLALANP GAEIIGVDLS LKSVELAQER LKFQGFPEVK FYALGLDEIG
QLEIAFDYIN CDELLYFFDD PAAALGQMKA VLKPDGIIRA NLHSKNQRIA HYRLQELFKF
LGFLDGNPEA AEMEAVTELM NALQPGVLSR AAVWNLPLQL QKEEKQDELE QWLLANLLLQ
ADKGYGVPDL RQYLETAGLE FLGMVQAPLW RLSELFGDRD QIPAFWALGI QEASLLDQAY
LYDLLHPVNR LFDFWCSLQP LAPTQAWENL PLEQRLGLKV QLHPQLATSG IEQQLQEKLK
LRERFSLARA LHGEFLGLLT YEPLFGALIK PLFEKVLSVQ ELVQRFQQLQ PLDYVTGELW
ELEAVAELVW NFLAELERDQ CLFLTQA