Gene Synpcc7942_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0040 
Symbol 
ID3775752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp38630 
End bp39007 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content59% 
IMG OID637798445 
Productdihydroneopterin aldolase dihydroneopterin aldolase 
Protein accessionYP_399059 
Protein GI81298851 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00526] FolB domain
[TIGR00525] dihydroneopterin aldolase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGT TGGTGGTGCG CGGCATTCGC GCCTACGGCT ACACGGGGTT CTTTGATGCC 
GAGCAAGAAC TGGGCCAGTG GTTTGAGGTG GACTTGCGCG TCTGGGTCGA TCTTCAGCCT
GCTGGGGACA GCGATCAGCT CGGCGACACC CTCGACTACA GCCAAGCGGT ACAGGTCGTG
CAAACGGGGA TTCGCCAGAG TCGCTTTCGC ACGATCGAGC GATTGGCGGC TGATCTCTGC
GATCGCCTGT TTCAGCAGTT TCCAGCCCTA CCGGAATTGG AACTGACGTT GCGGAAACTG
GCCCCTCCCA TTCCTGACTT TAGTGGTGAT GTCAGCTTGG TTCTGCGGCG ATCGCGGAAG
TTAACGGGTG CGGATTGA
 
Protein sequence
MDVLVVRGIR AYGYTGFFDA EQELGQWFEV DLRVWVDLQP AGDSDQLGDT LDYSQAVQVV 
QTGIRQSRFR TIERLAADLC DRLFQQFPAL PELELTLRKL APPIPDFSGD VSLVLRRSRK
LTGAD