Gene Synpcc7942_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0036 
Symbol 
ID3775849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp35341 
End bp36126 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content57% 
IMG OID637798441 
Producthypothetical protein 
Protein accessionYP_399055 
Protein GI81298847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.365949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTC AGCTTTCACC CCCCCCCAAC CCTTTGTGGC AAGACAAGCG GCAAACGGCT 
GCAGACTGGT TAGCCTACTT TCAGCGTAAT CATGCCCAAT TACTGCCTTT GCCTGCCGAA
GCCGGAATAA CCGCTGCAGA TTATCCGCCT GCTTTTTGGC GATCGATTGC CATGTTTCAA
CTGGGTGAAT ATTCCGAAGG CCATAACTTG ATGCGGGCAA CCCATCGCTG GATTGCCAAT
GGCGGTGACC CCGACTTAGC ATCAGCAATG CAGTGGTTCA TTCGCGAGGA ACAGCGCCAC
GCCGCTGATT TGGGTCGCTT CCTCAAGGCT ATTCAGCAAC CCTGCCTGCG ATCGCACTGG
CTCGATCAAA CTTTTCGGCG GTTGCGGCGA CAGAACCTCA ACCTCGAAAC AGCGTTGACT
GTCTTGCTCA ATGCCGAAAT TGTCGGTCTA CTCTACGCCC AAGCTCTACA ACAGGCGATC
GCCTCACCCC TGCTTCAAAC CATCGCCCGC CAAATTGAAT GGGATGAGAG TCAGCATCTC
CGCTTCCAAG CTGTGCAGTT GCAACACCTC CGTCGCGAGC GATCGCCATG GCGTCGCCGC
CTCAGTCATG CCTTGCAGCG CAGCCTCCTC TGGCTAACCC TACGCGCCAT TTGGCCCGAT
CATCGGCCTG TGTTTCGGGC CGCAGGCTGG TCATTCGCCA ACCTCGAACA AGTAGCTTTT
GCGACTTTGG CGTCAACCCT AGATTCCACT TTGGCCCGCC AACCTGTGCA GTCCCAGCCA
GCCTAA
 
Protein sequence
MPPQLSPPPN PLWQDKRQTA ADWLAYFQRN HAQLLPLPAE AGITAADYPP AFWRSIAMFQ 
LGEYSEGHNL MRATHRWIAN GGDPDLASAM QWFIREEQRH AADLGRFLKA IQQPCLRSHW
LDQTFRRLRR QNLNLETALT VLLNAEIVGL LYAQALQQAI ASPLLQTIAR QIEWDESQHL
RFQAVQLQHL RRERSPWRRR LSHALQRSLL WLTLRAIWPD HRPVFRAAGW SFANLEQVAF
ATLASTLDST LARQPVQSQP A