Gene Synpcc7942_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0026 
Symbol 
ID3774246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp27082 
End bp28059 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content59% 
IMG OID637798431 
Producthypothetical protein 
Protein accessionYP_399045 
Protein GI81298837 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.838821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG CCACGACCTG TCAACTCGGT CCCAACGGAC CCACCGTTTC TGCTCTCGGC 
ATTGGCACTT GGGCTTGGGG CGACAGTCTC TACTGGACTT ACGGCCAAGA CTACGACGAA
GCGCAATTGC AGACGACCTT TGCCACTGCG ATCGCCGCTG GCGTCAGTTT TTTCGACACT
GCTGAAATCT ATGGCTTAGG CGAATCCGAG CGGATTCTAG GGCGCTGCCT CCAGCAAGGT
GATCAGCCTG CCCAGATCGC TACCAAGTAC TTCCCAATCC CTTGGCGATT CGGCAGCAAA
GCCGTACAAA AGGCGCTGGA TCAGAGTCTG GAACGGCTGC AGCGCCAGAG CATCGAACTC
TATCAAGTTC ACTGGCCGCC CGCTTTTTTG CTCGGACAAA CCAAGATCCT GAAAACCCTA
GCAGCGGCTT ATAAACGCGG TCAGATTCAA GCGATCGGTG TCAGCAACTA CAACGCCCGA
CAACTGCGGC AGGCCCATGC GCTCCTGGCT GAGCAGGGCG TTCCCCTCGC CGTCAACCAA
GTTCAATACT CGCTGTTGGA GCGTCGTATC GAAACCAACG GTAGCCTCGC CGCTGCCCGG
GAACTCGGCG TCACGATTTT GGCCTACTGT CCGCTGGCCC AAGGCTTGCT GACGGGCAAA
TATCGGCCAG ATGCGGACTC GCGCCCCACT GGTGCCCGCA AGATCAACCC GCAGTTCCGC
TCGCAGGCGC TGGAAAAACT GCAACCACTG CTGGATCAGC TAGCAGCACT GGGCGATCGC
TACGATCGCA CCATTCCTCA AGTCGCCTTG AACTGGTTGA TTGCCCAAGG CAACGTCATC
CCCATTCCCG GCGCAAAATC GCCAGCACAG GCCCAAGACA ATGCTGGTGC CCTCGGTTGG
CAACTCAGCC CTGAAGATGT CGCGAGTTTG GCTCAGCTCA GTTCTGGCGG GCGATCGCTG
GCGGCAGCTG CTCACTAA
 
Protein sequence
MTIATTCQLG PNGPTVSALG IGTWAWGDSL YWTYGQDYDE AQLQTTFATA IAAGVSFFDT 
AEIYGLGESE RILGRCLQQG DQPAQIATKY FPIPWRFGSK AVQKALDQSL ERLQRQSIEL
YQVHWPPAFL LGQTKILKTL AAAYKRGQIQ AIGVSNYNAR QLRQAHALLA EQGVPLAVNQ
VQYSLLERRI ETNGSLAAAR ELGVTILAYC PLAQGLLTGK YRPDADSRPT GARKINPQFR
SQALEKLQPL LDQLAALGDR YDRTIPQVAL NWLIAQGNVI PIPGAKSPAQ AQDNAGALGW
QLSPEDVASL AQLSSGGRSL AAAAH