| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0023 |
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| Symbol | |
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| ID | 3774243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 23057 |
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| End bp | 24121 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637798428 |
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| Product | calcium/proton exchanger |
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| Protein accession | YP_399042 |
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| Protein GI | 81298834 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.662707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATTA AGTCGCTGAT CTCATTTGGT TTACTCGTGT TTGTGCCGAT CTCGATCGCG
GCGGAATGGC TGCACTGGGG GGAAGGCGCA ATTTTTGTGA CCTCGGCGCT GGCGATCGTG
CCACTTGCGA TTTGGCTGAG TACGGCCACC GAAGAAATCG CGGTGGTGGT GGGTCCTTCG
ATTGGCGCAC TGCTTAATGC TGTATTCGGC AATGCCACGG AGCTGATCAT CGCCGTCGTG
GCACTGCGGG CGGGCCTCGT CGATATCGTC AAAGCCAGTA TCACCGGCAC GATCATCAGT
AACCTGCTAC TGGCGATGGG CCTGTCGATG CTGGTGGGCG GTATTGGTCG CCAAGAACAA
ACCTTCAAGC CAGTGGTAGC GCGGGTCAAC GGTTCGGCTA TGACTTTGGC AGTTCTTGCC
ATTCTCTTGC CGACGCTGGC GATCGCAACC GGTGGGGAAA CGCCGCCCTC GGAACTGGGC
TTTTCGCAGT TTGTCGCTTG GATTCTGCTG GCGGTCTATG GTCTAACGCT GCTGTTCTCA
CTCAAAACCC ACCGCAGTCT CTACGATGTG GGCGTGACTG AACATGAGCA CAGTGGCGAT
CGCCCTAACC TGCTGCTTTG GGTGGGTGTG CTGGCAGCTG CAACCCTCGC AGTTGCCTAC
GAGTCAGAAA TTTTTGTCGG TGTAGTCGAG TCTGTGACCG AAAAAGTCGG CCTGTCACCA
TTGTTTACTG GCGTGATTTT GCTGCCTCTA CTCGGTGGTG CGGCAGAATA CGTCACTGCC
GTCAGCGTGG CGCGCAAAGA CAATATGGAT CTGTCAGTTT CCGTGGCCCT CGGTTCAACC
CTGTTGGTCG CTTTGTTCGT GGCACCACTG TTGGTGCTGA TCGGCCCCTT GTTCGGCCAT
CCGCTGGATC TCAGTTTCAA CCTATTTGAA CTGGTGGCAG TCGTGGTCGC CGTCGCGGTC
AGTAACTTGA TCAGCATTGA CGGGCGATCG GACTGGCTGG AAGGTTGTCT CCTATTGGCG
GCCTACCTGA TTCTGGGTGC TGCTTTCTAC TTCCAATCCG CTTGA
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| Protein sequence | MSIKSLISFG LLVFVPISIA AEWLHWGEGA IFVTSALAIV PLAIWLSTAT EEIAVVVGPS
IGALLNAVFG NATELIIAVV ALRAGLVDIV KASITGTIIS NLLLAMGLSM LVGGIGRQEQ
TFKPVVARVN GSAMTLAVLA ILLPTLAIAT GGETPPSELG FSQFVAWILL AVYGLTLLFS
LKTHRSLYDV GVTEHEHSGD RPNLLLWVGV LAAATLAVAY ESEIFVGVVE SVTEKVGLSP
LFTGVILLPL LGGAAEYVTA VSVARKDNMD LSVSVALGST LLVALFVAPL LVLIGPLFGH
PLDLSFNLFE LVAVVVAVAV SNLISIDGRS DWLEGCLLLA AYLILGAAFY FQSA
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