Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0020 |
Symbol | |
ID | 3774240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 20490 |
End bp | 21092 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798425 |
Product | hypothetical protein |
Protein accession | YP_399039 |
Protein GI | 81298831 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.589418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCTCA ACCGCCGCTG GCGCTATGGC CTAGGGCTGT CGACTCTGTT CATCGTTCTT GGTGTACAGG GTTGGCAGCA ATGGCAGCAA CGTCGCTGGG CAGACACTCT GGGGATTACC GCCGCACCTT TGCCGAGCGA TCGCCTAGTG ACGTTGGCCG ACTGGCAGCG CCGCCTTGAT CCCTTGCGGT TGACGCCGCG CCAGCAGCAA CAATTGGAGC CTTTGCTGAT CAGCTTGCAG CGGCTGCGGG TCTCAGTGGA ACTCGAAGCC GACCCCCACG ATCGCTATGC TGGGCTGTGG TTACCAAGTC AGCGGCAGAT TCGCCTCAAT CCTCGCTTGC TGCGATCGCC TTCCGCTTTA CTGCAAAGCC TCAGTCACGA GAGTGTTCAT GTAGCTCAAA GCTGTCGGTC TAATCTGTTG TGGGGCTACA GTCCAGTGCC ACTGGGGCTA GCGACCGATC CCCAAGTACG GCGACGGGTT GACCAAAGCC CGCTCTACCA AAACTATCCG GGCGATCGGC GTGTGGAATA TGAAGCCCAC ACCTACGCCC AGCAGCCTGA GCAAGTGGTG CAAATCCTAA AAACGGCCTG TACTGAATCC TGA
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Protein sequence | MRLNRRWRYG LGLSTLFIVL GVQGWQQWQQ RRWADTLGIT AAPLPSDRLV TLADWQRRLD PLRLTPRQQQ QLEPLLISLQ RLRVSVELEA DPHDRYAGLW LPSQRQIRLN PRLLRSPSAL LQSLSHESVH VAQSCRSNLL WGYSPVPLGL ATDPQVRRRV DQSPLYQNYP GDRRVEYEAH TYAQQPEQVV QILKTACTES
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