Gene Synpcc7942_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0020 
Symbol 
ID3774240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp20490 
End bp21092 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content59% 
IMG OID637798425 
Producthypothetical protein 
Protein accessionYP_399039 
Protein GI81298831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.589418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTCA ACCGCCGCTG GCGCTATGGC CTAGGGCTGT CGACTCTGTT CATCGTTCTT 
GGTGTACAGG GTTGGCAGCA ATGGCAGCAA CGTCGCTGGG CAGACACTCT GGGGATTACC
GCCGCACCTT TGCCGAGCGA TCGCCTAGTG ACGTTGGCCG ACTGGCAGCG CCGCCTTGAT
CCCTTGCGGT TGACGCCGCG CCAGCAGCAA CAATTGGAGC CTTTGCTGAT CAGCTTGCAG
CGGCTGCGGG TCTCAGTGGA ACTCGAAGCC GACCCCCACG ATCGCTATGC TGGGCTGTGG
TTACCAAGTC AGCGGCAGAT TCGCCTCAAT CCTCGCTTGC TGCGATCGCC TTCCGCTTTA
CTGCAAAGCC TCAGTCACGA GAGTGTTCAT GTAGCTCAAA GCTGTCGGTC TAATCTGTTG
TGGGGCTACA GTCCAGTGCC ACTGGGGCTA GCGACCGATC CCCAAGTACG GCGACGGGTT
GACCAAAGCC CGCTCTACCA AAACTATCCG GGCGATCGGC GTGTGGAATA TGAAGCCCAC
ACCTACGCCC AGCAGCCTGA GCAAGTGGTG CAAATCCTAA AAACGGCCTG TACTGAATCC
TGA
 
Protein sequence
MRLNRRWRYG LGLSTLFIVL GVQGWQQWQQ RRWADTLGIT AAPLPSDRLV TLADWQRRLD 
PLRLTPRQQQ QLEPLLISLQ RLRVSVELEA DPHDRYAGLW LPSQRQIRLN PRLLRSPSAL
LQSLSHESVH VAQSCRSNLL WGYSPVPLGL ATDPQVRRRV DQSPLYQNYP GDRRVEYEAH
TYAQQPEQVV QILKTACTES