| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0017 |
|---|
| Symbol | |
|---|
| ID | 3774237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 15630 |
|---|
| End bp | 16193 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637798422 |
|---|
| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
|---|
| Protein accession | YP_399036 |
|---|
| Protein GI | 81298828 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.744012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGG ATTGGGTTGC GGATCTCCAA CAAGCGCGGA TCGTTGCTGT CTTACGATCG
CCTGATTTAA CTCAGGGTTT CGCGATGGCG GAAACGGCGA TCGCCCGAGG ATTACGTTGG
TTAGAAGTGA CTTGGACCAG CGATCGCCCA GCAGAATTAC TGTCTCAGTT GCGGGACAAA
TATCCTGATT GTTGCTGGGG CGCAGGGAGT CTGCTGAGCC TGACGGATTT GGAAGAAGCG
ATCGCTGCCG GAGCGCAGTT TGGCGTCAGC CCGATCCTGT CCCTGCCGCT ACTGGAACGG
GCTCAAGCCC GGGATCTTCC CTTTCTGCCT GGTGCGTTAA CACCGACAGA AATTATGACG
GCTCATGCGG CAGGTGCGGC TGTCGTAAAA CTTTTTCCAG CTAGTAGTGC TGGTGGTCCT
GCCTACGTAC GATCGCTGCA ACAACCGCTC AATCATCCCA AGCTGTTTGC CTGCGGCGGC
ATTCATCCTG ATGCCGTTCA GAGTTATCTC GATGCGGGTG CGATCGCAGT CGGCCTCGGA
TCTCAACTCT TTGCGAAGAC CTAA
|
|---|
| Protein sequence | MTPDWVADLQ QARIVAVLRS PDLTQGFAMA ETAIARGLRW LEVTWTSDRP AELLSQLRDK
YPDCCWGAGS LLSLTDLEEA IAAGAQFGVS PILSLPLLER AQARDLPFLP GALTPTEIMT
AHAAGAAVVK LFPASSAGGP AYVRSLQQPL NHPKLFACGG IHPDAVQSYL DAGAIAVGLG
SQLFAKT
|
|---|
| |