Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1788 |
Symbol | |
ID | 3766615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1680413 |
End bp | 1681681 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637798334 |
Product | major facilitator superfamily multidrug-efflux transporter |
Protein accession | YP_398285 |
Protein GI | 78780173 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGAAA GTTTATTAAA ACCAAATAAA AAATTTACTC TCCTTAGTGC GTTTATCACT CTTCTCAATG ATCGTTTAAG TGAAAGTATA CTGTTACCCA TATTACCCTC TTTTGTTTTA CTTTTTGACT CTAAAGCAAG TACATATGGT TTATTATCCT GCACTTACCA ATTAGCTCAA TTTACAGCTT CTCCTTTTAT AGGAATTATG AGTGATAGAT ATGGAAGAAG ACCTGTCACT CTTTTTTGTA TTACTGGTTC AGTAATAGGA ATATCAATAT TATCTTTTAC GGTTCTTTTT AATTGGTCAA ATTCAATAGC CTCTATCCCG TTATTTTTAT TATTTTTAGC GCGACTAATT GACGGTTTAA GTGGGGGGAC TGCAGCTACT GCAACAACAA TTCTTGCAGA TATTTCAAGC CCTGAAAAAA GAGCAAAAAC ATTTGGTCTT ATTGGTGTAG CTTTTGGTTT AAGTTTTTTC TTGGGTAATA TTTTTGTTGT AATTTTTGCA AAAAATACAA ATAATAATTT TATTATTCCA GTTTTGATAG CCTCAATCAT TCCAATAATC AATTTCCTCC TTGTATTTTT TTACTTGCCA GAAACCAAGC CTAATAGTGA CTCAAATAAA TCAACAACTA TTTTTAAAAA CCCTATAAAA GAGCTATTTA AAGTTTTCAA AGAAGAAAAG ATTAAAAAAT TATCATTAGC TTTTTTTATT TACTTTATTG CTTTTACTGG ATTGACCAAT ATCCTTATAT TTTTCCTTCA AGAATCTTTA AACTGGACGA CCAAAGCATC AAGTGGAACT CTTGTTGTAG TAGGAATCAT TGCAATTATC GTTCAGGGAG GACTAATTGG ACCTCTGGTA AAGCAATTTG GCGAAATGCG ATTAACACTT ATTGGATCAG GCTTCATTCT TGTGGCATGT GCTCTTTTAA TAACTGCTCC AAAAGAAAAT GCGACAATTA ATATTTATTC AGCTGTTTCA TTTTTAGCCG TTGGGGCAGG GTTAATTACT CCCACCTTAA GAGCACTAAT ATCAAAGAAA TTAGACGTTG ATAAACAAGG ATCAATTTTA AGTAACCTTC AGGGTCTACA GAGTCTTGGA GGAGTCTTAG GAATTGCAAT GGCCGGAAGG GTTTATGATA GTTTTGGTCC TAAATCACCT TTTATAGCTG GTTCCGTTAT CTTAATTTTC ATGATATACC TTATTGCAGA GGGTAAAAAT AATAATTCTT TTAAGAATCA AAAATCAAAA GTATTTTAA
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Protein sequence | MKESLLKPNK KFTLLSAFIT LLNDRLSESI LLPILPSFVL LFDSKASTYG LLSCTYQLAQ FTASPFIGIM SDRYGRRPVT LFCITGSVIG ISILSFTVLF NWSNSIASIP LFLLFLARLI DGLSGGTAAT ATTILADISS PEKRAKTFGL IGVAFGLSFF LGNIFVVIFA KNTNNNFIIP VLIASIIPII NFLLVFFYLP ETKPNSDSNK STTIFKNPIK ELFKVFKEEK IKKLSLAFFI YFIAFTGLTN ILIFFLQESL NWTTKASSGT LVVVGIIAII VQGGLIGPLV KQFGEMRLTL IGSGFILVAC ALLITAPKEN ATINIYSAVS FLAVGAGLIT PTLRALISKK LDVDKQGSIL SNLQGLQSLG GVLGIAMAGR VYDSFGPKSP FIAGSVILIF MIYLIAEGKN NNSFKNQKSK VF
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