| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1775 |
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| Symbol | valS |
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| ID | 3766601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1665406 |
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| End bp | 1668162 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637798320 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_398272 |
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| Protein GI | 78780160 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.651419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAGA TGAATGATCA ATTATCTTTA GAGAATTATT CACCTTTTGA AGTAGAGAAA
AAGTGGCAAG AAAAATGGGA AAGTTTAAAG GCGTTTAGTC CTAACCCGGA GGATGATGGT
GAGCCTTTTT GTATTGTTAT TCCGCCACCA AATGTAACTG GATCTTTGCA TATGGGACAT
GCATTCAATA CAGCTTTGAT AGATGTTGTA GTGCGTTTTC AAAGACTTTT AGGGAAGAAT
GTTTTGTGTT TACCAGGAAC TGATCATGCT TCAATAGCTG TTCAAACTAT TCTTGAAAAA
CAATTAAAAA GTGAAGGCAA AACAAGCGAT GATATTGGAA GAGATGAATT TCTTAAAAGA
GCATGGAACT GGAAAGAACA AAGTGGTGGC AGAATAGTTT CTCAATTAAA AAGGATAGGA
TATTCAGTTG ACTGGACTAG AGAAAGATTT ACTCTGGATC AAAAATTAAA TGAGGCAGTT
GTTGAGGCTT TTAATATTCT TTACAAAAAG AATTTGATTT ATAGTGGTGA ATATTTAGTT
AATTGGTGTC CTGAATCTCA ATCTGCCGTA AGTGATCTTG AAGTTGAAAT GCAAGAAGTA
AAGGGTCATT TATGGCATTT TAAATACCCT TTAATTTCTG AAAGTGGTGA ACAGTTAGAT
AAGTACTTAG AGGTAGCAAC AACAAGACCA GAAACTCTTT TAGGTGATAC TGCTTTGGCA
GTTAATCCTG ATGATGATAG ATATAAAGAA TTTATTGGTG TCAAAGTAAA AGTCCCTTTC
GTTGATAGAG CAATACCTAT TATTGCTGAT TCACATGTTG ATAAAGATTT TGGTACAGGA
TGTGTCAAGG TGACTCCAGC CCACGATCCC AATGATTTTG CCATAGGAAA AAGGCATAAT
TTAAAACAGA TTAATGTAAT GAATAAAGAT GGAACTTTAA ATAGTAATGC AGGTAAATTT
GAACATTTAG ATAGATATGA GGCTAGAAAG AAAATTATCA AAGAATTGGA TAACTTAGGC
CTTTTGACAA AGATAGAGGA TTATAAACAT ACTGTTCCTT TTTCTGATAG AGGTAAGGTG
CCAATCGAAC CTTTATTGTC AACACAATGG TTTTTGAAAA TGGATGAAAT ATCACAAGGA
TGTCTTAATG AAATTGATTC TAAAAAACCA TCGTTTATTC CTCCACGCTG GGAGAAAGTT
TATAAGGATT GGTTAGAGAA TATTAATGAT TGGTGTATCA GTAGGCAATT ATGGTGGGGG
CATCAAATAC CAGTATGGTA CGTTTTAGAT GAATCTCAAG ACTCAATAGA ACAAAATACT
CCATATGTCG TTGCAAGCAA TGAGGAGGAT GCCTTAATCA AAGCTAATAA AAAATTTGGA
TTAAATATTA AATTGGTTCG TGATAAAGAT GTTTTGGATA CTTGGTTTTC AAGTGGTTTA
TGGCCTTTCT CAACCCTTGG TTGGCCAAAT ACAAATGATC CGGATTTTAA AAAATGGTAT
CCAAATAGTG TTCTTGTTAC TGGTTTCGAT ATTATTTTCT TCTGGGTTGC GAGAATGACA
ATGATGGGGA ATACTTTCAC GAATAATATT CCTTTTAGGG ATGTGTATAT TCATGGTCTA
GTCCGAGATG AAAATAATAA AAAAATGAGT AAAAGTTCAG GTAATGGTAT TGACCCAATA
CTTTTAATTG AGAAATATGG TTCTGATGCT TTGCGATTTG CTTTAATTCG TGAAGTTGCA
GGCGCTGGAC AAGATATCCG GCTTGATTTT GATAGGAAAA AAGATACATC TTCAACTGTT
GAAGCTTCAA GAAATTTTGC GAATAAATTA TGGAATGCAA CTAAATTTGT ATTAATTAAT
AAAACTTCCA ACAATAATTA TTCGCTTAAT GAGAGTGATG AAGATTCTTT AGAGTTATGT
GATAAGTGGA TTTTATCGAA ATTGAATCAG GTAAATATAA AGGTTGCTGC TTTGTTGAAA
GAGTATAAAT TGGGAGAATC TGCGAAACTA TTATATGAAT TTACATGGAA TGATTTTTGT
GACTGGTATG TAGAATTTGC TAAGCAAAGG TTTAATAATA AAGAGATTAA AAATAGACAA
TTATCTGAAA AAGTTTTAAT AAAAGTGCTC AATGATATTT TGGTGATGAT TCATCCTTTT
ATGCCGCACA TTACTGAAGA ACTCTGGCAC GCACTCCAAC TAAAACCAGA TCAATCATTA
TTATCTCTTC AAAGATGGCC AACGCAAGAA AATAAATTTG TTGATAATAA GCTTGATAAT
TCCTTTCAGC AACTTTTTGA AATTATTAGA TTAATTAGAA ATTTGAGAGC TGAATTAGGC
CTAAAGCCAT CAGAAAAAGT TCCTGTTTAC TTAATTTCAG ATAATGATGA ATTGATTGAT
TTTTTGAAAA TTCTAGTTGA TGATATTCAA ACCTTAACTA AATCTTCTGA AGTATTTATT
TTTAAAACTA ATGCTGTTGA TAAAAAAGAG TTTGCTAAAT CTTTTTCTGG GATAATTAGT
GATTTAGAGG TTTACTTACC TTTTCAGGAT TTTGTAAATA TAGATGCATT AAAGGAAAGG
TTAACCAAGG ATTTAAAAAA GGTGACTATT GAATTGGAAA ATTTAAATAA GAGATTATCT
AATAAAAATT TCGTTGATAA GGCTCCAAAA GATATTGTTG ATGAATGCAG ATTTAAATTA
AATGAGGGTT CGGTACAAAT GGAGAGAATT ACTAAAAAAC TCGAACTTTT GAATTGA
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| Protein sequence | MTEMNDQLSL ENYSPFEVEK KWQEKWESLK AFSPNPEDDG EPFCIVIPPP NVTGSLHMGH
AFNTALIDVV VRFQRLLGKN VLCLPGTDHA SIAVQTILEK QLKSEGKTSD DIGRDEFLKR
AWNWKEQSGG RIVSQLKRIG YSVDWTRERF TLDQKLNEAV VEAFNILYKK NLIYSGEYLV
NWCPESQSAV SDLEVEMQEV KGHLWHFKYP LISESGEQLD KYLEVATTRP ETLLGDTALA
VNPDDDRYKE FIGVKVKVPF VDRAIPIIAD SHVDKDFGTG CVKVTPAHDP NDFAIGKRHN
LKQINVMNKD GTLNSNAGKF EHLDRYEARK KIIKELDNLG LLTKIEDYKH TVPFSDRGKV
PIEPLLSTQW FLKMDEISQG CLNEIDSKKP SFIPPRWEKV YKDWLENIND WCISRQLWWG
HQIPVWYVLD ESQDSIEQNT PYVVASNEED ALIKANKKFG LNIKLVRDKD VLDTWFSSGL
WPFSTLGWPN TNDPDFKKWY PNSVLVTGFD IIFFWVARMT MMGNTFTNNI PFRDVYIHGL
VRDENNKKMS KSSGNGIDPI LLIEKYGSDA LRFALIREVA GAGQDIRLDF DRKKDTSSTV
EASRNFANKL WNATKFVLIN KTSNNNYSLN ESDEDSLELC DKWILSKLNQ VNIKVAALLK
EYKLGESAKL LYEFTWNDFC DWYVEFAKQR FNNKEIKNRQ LSEKVLIKVL NDILVMIHPF
MPHITEELWH ALQLKPDQSL LSLQRWPTQE NKFVDNKLDN SFQQLFEIIR LIRNLRAELG
LKPSEKVPVY LISDNDELID FLKILVDDIQ TLTKSSEVFI FKTNAVDKKE FAKSFSGIIS
DLEVYLPFQD FVNIDALKER LTKDLKKVTI ELENLNKRLS NKNFVDKAPK DIVDECRFKL
NEGSVQMERI TKKLELLN
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