Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1732 |
Symbol | secA |
ID | 3766557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1618103 |
End bp | 1620934 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637798276 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_398229 |
Protein GI | 78780117 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.40392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAC TTTTGTTGGG AGATCCGAAT ACACGAAAGT TAAAGCGCTA TCAACCAATA GTGGAAGAGA TAAATTTTTT AGAAGAAGAA ATTTCTAAAT TAACTGATGA TGAGTTGAGA CAAGAAACTC ATAATCTCAA ATCACAGATC TCATCAGAAT CAGATATTAA ACAACAAAAA GAACTCTTGG ATGAATCTCT TCCAAAAGCC TTTGCGATTG TTAGAGAAGC AAGTAAACGT GTTCTGGATA TGCGACATTT TGATGTTCAG TTAATAGGCG GGATGGTTTT ACATGAATGT CAAATCGCTG AGATGAAGAC TGGAGAAGGA AAAACTCTTG TAGCAACATT ACCTTGTTAT TTAAATGCTT TAACTGGAAA AGGGGTTCAT GTAGTTACTG TAAATGATTA TTTAGCTAGA AGAGATGCTG AGTGGATGGG CCAAGTTCAT CGTTTTTTAG GCTTATCCGT TGGTTTGATT CAACAAGATA TGAGCCCTGT TCAGAGAAAG AAAAATTACG ACTGCGATAT AACTTATGCT ACGAATTCTG AATTAGGATT TGATTATTTA AGAGATAATA TGTCCACCGA TATTAATGAG GTAGTGCAAA GACCATTCAA TTACTGTGTG ATTGATGAGG TTGATTCAAT ATTAATTGAT GAAGCAAGAA CACCTCTAAT CATTTCTGGC CAAGTTGAAA GACCCCAAGA AAAATATCAA AAAGCTTCAG AATTAGCTCT GGCACTAGTT AAAGCAAAAG AAATAGGTAA AGATGGTATA GATCCAGAAG GCGATTATGA AGTTGATGAA AAGCAGAGAA GTTGTATATT AACTGATCAG GGTTTCGCTA AATGTGAAGA GTATTTGGCA GTTAGCGATT TATATAATCC CAAAGATCCT TGGGCGCACT ACATAACCAA TGCTTTAAAA GCTAAAGAAT TATTTATTAA AGATGTAAAT TATATTATTA AAAATAATGA GGCTGTAATA GTGGACGAAT TTACAGGAAG AGTAATGCCA GGAAGGAGAT GGAGTGACGG ACAGCATCAG GCGATAGAAG CGAAAGAGAG TCTTAAAATT CAGCCTGAGA CTCAAACATT AGCATCTATA ACTTATCAGA ATTTTTTCCT TTTATATCCT GGTTTGGCAG GTATGACAGG AACAGCAAAA ACAGAAGAGG TTGAATTTGA AAAAACTTAT AAATTAGAAT CAACCGTTAT ACCAACAAAT CAAATAAGAA AGAGAGAAGA TTTGCCTGAT CAAGTATTTA AGACAGAGAT AGGTAAATGG AAAGCTGTTG CTAGAGAAAC TGCGCAAATT CATAGAGCTG GTAGACCTGT TTTAGTTGGT ACAACAAGTG TTGAAAAAAG TGAGTTGTTA AGTTCACTTT TAGCTGAAGA AAAAATCCCA CATAATTTGT TAAACGCTAA GCCAGAGAAC GTTGAACGTG AGGCAGAAAT TGTAGCTCAG GCTGGAAGAG CAGGTGCTGT TACTATTGCT ACTAATATGG CTGGAAGGGG AACAGATATA ATTCTCGGCG GTAACAGTGA TTATATGGCA AGACTTAAAT TAAAAGAGAT TCTAATTCCT TTATTAGTAA AGCCAAATAA TGAGCATAAG CCACCAATCC CTAAACAACG AAGTTCAAAA TCTAAGGGTG GTTTTTCTTC AAAAGTTGGC TCAAATTTAA CAAAGAACAT TCCAGACTAT TCAACAAGTC TTTTTCCTTG CAAACTGGAT GAAGAAATCC AAAAGAAACT CTCAGTTTTA TCTGATGAAC TTGTTAAGAA TTGGGGTGAT AGACAACTTT CTGTCTTGGA TTTAGATGAC AGAATAGCTA CAGCTGCAGA AAAAGCACCA ACCGAAGATA AAATGATAAA GCTTTTGAGA GAATCTTTAT CACGTGTAAA AGACGAATAT GAAAAAGTGT TGACTCATGA AGAAAAAAAA GTAAGAGAAG TCGGAGGCTT ACATGTTATT GGTACTGAGA GACATGAATC AAGAAGGGTG GATAATCAAC TTAGAGGTAG AGCAGGAAGA CAAGGTGATT TTGGAAGTAC AAGATTCTTT TTATCTTTAG AAGATAATTT ATTAAGGATT TTTGGGGGTG AAAGGGTAGC AAATCTAATG AATGCATTTA GGGTTGATGA AGATATGCCT ATAGAATCAG GAATGCTTAC TAGGTCTTTA GAAAGTGCTC AAAAGAAAGT AGAAACATAT TATTACGATA TTAGAAAACA AGTTTTTGAA TATGATGAGG TAATGAATAA TCAAAGAAAG GCAGTTTATA GCGAAAGACT AAGAGTCTTG CAAGGCACTG ATTTAAAGAG ACAAGTTATA GGATATGGAG AAAGAACAAT GTATGAAATT GTGGAGGCTT ATATTAATCC TGATCTACCT CCAGAAGAAT GGGATATTGC TCAATTAATT TCTAAAGTCA AAGAATTTAT ATATTTATTA GATGACCTTA AAGCTGATGA CGTCAAGTTA CTTTCAATAG AAGAATTAAA AAACTATCTT CAAGAGCAAT TGCGAACAGC TTATGATTTG AAGGAATCAC AAATAGAACA GATTAGACCA GGATTAATGA GAGAAGCTGA AAGATTCTTT ATTTTGCAGC AAATTGATAA TTTATGGAGA GAACATCTTC AATCCATGGA TTCTTTAAGA GAATCGGTTG GATTGAGAGG TTATGGACAA AAAGATCCTT TAATCGAGTA CAAAAATGAA GGATATGATA TGTTTCTCGA AATGATGACT AATATGAGAC GCAATGTTAT TTATTCAATG TTTATGTTTC AACCTAAAAC TGATAAGGAT GATAAAAATT AA
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Protein sequence | MLKLLLGDPN TRKLKRYQPI VEEINFLEEE ISKLTDDELR QETHNLKSQI SSESDIKQQK ELLDESLPKA FAIVREASKR VLDMRHFDVQ LIGGMVLHEC QIAEMKTGEG KTLVATLPCY LNALTGKGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMSPVQRK KNYDCDITYA TNSELGFDYL RDNMSTDINE VVQRPFNYCV IDEVDSILID EARTPLIISG QVERPQEKYQ KASELALALV KAKEIGKDGI DPEGDYEVDE KQRSCILTDQ GFAKCEEYLA VSDLYNPKDP WAHYITNALK AKELFIKDVN YIIKNNEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKESLKI QPETQTLASI TYQNFFLLYP GLAGMTGTAK TEEVEFEKTY KLESTVIPTN QIRKREDLPD QVFKTEIGKW KAVARETAQI HRAGRPVLVG TTSVEKSELL SSLLAEEKIP HNLLNAKPEN VEREAEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLKEILIP LLVKPNNEHK PPIPKQRSSK SKGGFSSKVG SNLTKNIPDY STSLFPCKLD EEIQKKLSVL SDELVKNWGD RQLSVLDLDD RIATAAEKAP TEDKMIKLLR ESLSRVKDEY EKVLTHEEKK VREVGGLHVI GTERHESRRV DNQLRGRAGR QGDFGSTRFF LSLEDNLLRI FGGERVANLM NAFRVDEDMP IESGMLTRSL ESAQKKVETY YYDIRKQVFE YDEVMNNQRK AVYSERLRVL QGTDLKRQVI GYGERTMYEI VEAYINPDLP PEEWDIAQLI SKVKEFIYLL DDLKADDVKL LSIEELKNYL QEQLRTAYDL KESQIEQIRP GLMREAERFF ILQQIDNLWR EHLQSMDSLR ESVGLRGYGQ KDPLIEYKNE GYDMFLEMMT NMRRNVIYSM FMFQPKTDKD DKN
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