Gene PMT9312_1729 details

Gene Information

• Locus tag: PMT9312_1729
• Symbol: infC
• ID: 3766554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1615716
• End bp: 1616288
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637798273
• Product: translation initiation factor IF-3
• Protein accession: YP_398226
• Protein GI: 78780114
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACCAC GCCCACGCTT TGACCGTCGC TCTCCTGTTA GGGAGCTCCC TAATATTAAT 
GAAAGAATAA AATATCCCCA ATTGAGAGTC GTTGATTCGG ATGGGAAACA ACTAGGAGTC 
ATAGATAGAT TAGAAGCATT AGAAATAGCC TCTCAAAGAG AACTTGATTT AGTTTTGGTA 
AGTGAAAAAG CAAATCCTCC TGTTTGCAGA GTAATGGACT ATGGAAAATA TAAATTTGAA 
CAAGAAAAGA AAGCAAAAGA AGCAAGAAAA AAATCTCATC AAACAGAAGT TAAAGAAGTA 
AAAATGAGAT ACAAAATTGA CAAACATGAT TATGACGTAC GAATCGGTCA AGCTACTAAA 
TTTTTAAAAT CGGGCGATAA AGTAAAATGC ACTGTATTTT TTAGAGGCAG AGAAATTCAA 
CACTCTAATT TAGCGGAAAC ACTCCTTTTA AAAATGGCTA ATGATTTAGA AGAACAATCA 
GAAATACAAC AAAAGCCAAA AAGAGAAGGA AGAAACATGA TTATGTTTTT AAGCCCTAGA 
AAAACTCCTC TTATTAAGAA AGATGAAGGA TAA 

 

Protein sequence

MPPRPRFDRR SPVRELPNIN ERIKYPQLRV VDSDGKQLGV IDRLEALEIA SQRELDLVLV 
SEKANPPVCR VMDYGKYKFE QEKKAKEARK KSHQTEVKEV KMRYKIDKHD YDVRIGQATK 
FLKSGDKVKC TVFFRGREIQ HSNLAETLLL KMANDLEEQS EIQQKPKREG RNMIMFLSPR 
KTPLIKKDEG