Gene PMT9312_1727 details

Gene Information

• Locus tag: PMT9312_1727
• Symbol: gyrB
• ID: 3766552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 1612654
• End bp: 1614621
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637798271
• Product: DNA gyrase subunit B
• Protein accession: YP_398224
• Protein GI: 78780112
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.22827
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAGG ACAAAAGATC TAATAAAATC TCAAATGAAT ATGGTGCGGA ACAGATTCAG 
GTCTTAGAGG GATTAGAGCC AGTTCGTAAA CGTCCTGGCA TGTATATAGG TTCTACAGGT 
CCTAGAGGTT TGCATCATTT AGTATATGAA GTCGTTGATA ATTCAGTTGA TGAAGCACTT 
GCAGGTCATT GTGATCATAT AGAAATAGTT CTTCAATCAG ATGGATCAGC TTTAATTTCT 
GATAATGGAC GAGGTATCCC AACAGATATT CATCCAAGGA CGGGTAAAAG TGCCTTAGAA 
ACTGTACTGA CTGTTCTTCA TGCGGGAGGT AAATTCGGAA GTGGTGGCTA TAAAGTTTCA 
GGCGGATTGC ATGGAGTAGG AATCTCTGTA GTTAATGCTT TAAGCGAATG GGTTAATGTG 
ACTGTTTATA GAGATGGTAG TGAGTTTAAT CAAAGATTTG AAAAAGGTGT ATCGCAGAAT 
GTATTGCAAA GTAAAAAGCA GACTAAAAAA CCTTTTAAAA AAGGAACCAC TATTTGTTTT 
AAACCTGATA AAACGATTTT TTCTGGAGGA ATCGAATTCG AATATGCTCT TCTCTCATCA 
AGATTAAGAG AACTTGCTTA TCTTAATGGC GGTGTAAAAA TTGTTTTTAG AGATGAGAGA 
AATAAATTGT CAGATGGTTC TTTTAAAGAA GAAATTTACT TATATCAAGG AGGCATTAAA 
GAATATGTTC AATACATGAA TGCGGAAAAA GAGGCCATTC ATCCTGACAT AATTTATGTT 
GACTCACAAA AAGAAAACGT TTACGTAGAA GCAGCTTTGC AATGGTGTTC AGATGTATAT 
TCAGATAATA TTTTAGGTTT TGCAAATAAT ATTAGAACTA TTGATGGAGG AACTCATATT 
GAAGGATTAA AGACAGTTTT GACAAGAACG TTCAATAATC TTGCAAAAAA AAGAGGTAAA 
AGAAAAGATA TTGAAAAAAA TTTAGCTGGC GAAAATATCA GAGAGGGCTT AACTGTAGTT 
TTATCCGTTA AAGTTCCAGA TCCCGAATTT GAGGGACAAA CAAAAACAAA ATTAGGTAAT 
ACGGAAGTAA GAGGAATTGT TGATTCTCTT ATTGGGGAGG CTCTTACAAA ATTTATGGAA 
TTTAATCCTG GAATTTTAGA CTTGGTTCTT GAGAAAGCAA TTCAATCATT CAATGCAGCA 
GAAGCTGCAA GAAGGGCTAG AGAATTAGTA AGAAGAAAAA GTGTTCTTGA AAGCTCAACT 
TTGCCAGGTA AATTAGCAGA TTGTAGTTCT AGAGATCCCG CAGAATCTGA AATTTATATC 
GTTGAGGGAG ATTCTGCTGG AGGTTCCGCA AAACAAGGCA GAGATAGAAA ATTTCAGGCT 
ATTTTGCCTC TTAGGGGTAA AATTCTAAAT ATCGAAAAAA CTGACGATAC AAAAATATAT 
AAAAATACAG AAATTCAGTC TTTAATAACA GCTTTAGGAT TAGGAATAAA AGGAGAGGAG 
TTCGACGTGA GCTCTTTGAG ATATCACAGA GTTGTAATTA TGACGGATGC TGATGTTGAC 
GGTGCTCATA TAAGAACCTT ATTATTGACA TTTTTTTATA GATATCAAAG AGAACTTGTT 
GAAAAGGGAT ATATATATAT TGCTTGTCCT CCCCTCTACA AGGTTGAAAG AGGTAAGAAT 
CATAAATACT GTTATAACGA GAATCAATTA AAGGATACAA TTGGAAGCTT TGGAGAAAAT 
GCAAATTACA ATATCCAAAG ATTTAAGGGA TTAGGTGAGA TGATGCCAAA ACAATTGTGG 
GATACAACTA TGAATCCTCA AACCAGGATG ATGAAAAGGG TTGAAATTGA AGATGCACTT 
GAAGCTGACA GAATATTTAA TATATTAATG GGAGATAAAG TTGCACCAAG AAGAGAATTT 
ATTGAAACTC ACAGTAGTAA ATTAGATATG GCAACTTTAG ATATATGA 

 

Protein sequence

MSEDKRSNKI SNEYGAEQIQ VLEGLEPVRK RPGMYIGSTG PRGLHHLVYE VVDNSVDEAL 
AGHCDHIEIV LQSDGSALIS DNGRGIPTDI HPRTGKSALE TVLTVLHAGG KFGSGGYKVS 
GGLHGVGISV VNALSEWVNV TVYRDGSEFN QRFEKGVSQN VLQSKKQTKK PFKKGTTICF 
KPDKTIFSGG IEFEYALLSS RLRELAYLNG GVKIVFRDER NKLSDGSFKE EIYLYQGGIK 
EYVQYMNAEK EAIHPDIIYV DSQKENVYVE AALQWCSDVY SDNILGFANN IRTIDGGTHI 
EGLKTVLTRT FNNLAKKRGK RKDIEKNLAG ENIREGLTVV LSVKVPDPEF EGQTKTKLGN 
TEVRGIVDSL IGEALTKFME FNPGILDLVL EKAIQSFNAA EAARRARELV RRKSVLESST 
LPGKLADCSS RDPAESEIYI VEGDSAGGSA KQGRDRKFQA ILPLRGKILN IEKTDDTKIY 
KNTEIQSLIT ALGLGIKGEE FDVSSLRYHR VVIMTDADVD GAHIRTLLLT FFYRYQRELV 
EKGYIYIACP PLYKVERGKN HKYCYNENQL KDTIGSFGEN ANYNIQRFKG LGEMMPKQLW 
DTTMNPQTRM MKRVEIEDAL EADRIFNILM GDKVAPRREF IETHSSKLDM ATLDI