Gene PMT9312_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1683 
Symbol 
ID3766506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1572658 
End bp1573131 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content34% 
IMG OID637798226 
Productprotein tyrosine phosphatase 
Protein accessionYP_398180 
Protein GI78780068 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTTCTGTTCT TTTTGTATGT TTGGGAAATA TTTGTAGGTC TCCTGCAGCA 
GAAGCTATTT TTATAAGTCT ACTTGAAAGG AAAGGATTAA CCGATGGCTT TATTGTAGAT
TCTGCTGGAA CTGGGAGTTG GCATATTGGG AAAAAAGCTG ACTCTAGGAT GAGAATTGCT
GCAGAAAGAA GAGACATAAA TATCTTAAGT AGGGCTCGTC AAATTACTAG CAAAGATTTT
GAGGAATTTA ACTATATTCT TGCGATGGAC GACTCAAATT TTCGAAATAT TCAAGATCTT
AAAAAGAGAA CATCTTCAAC TGATTTTGCA TCAATTAAAA AAATTCAAGA TTTTAGATCA
GTTTTTAATG AGCAAGAAGT TCCTGACCCC TATTTTGGAG GTGATGACGG CTTTGATTAT
GTTCTTGATA TATTAGAAGA TTCTGTGAGC GGCTTTTTGG AAAGTATGTC TTGA
 
Protein sequence
MKKISVLFVC LGNICRSPAA EAIFISLLER KGLTDGFIVD SAGTGSWHIG KKADSRMRIA 
AERRDINILS RARQITSKDF EEFNYILAMD DSNFRNIQDL KKRTSSTDFA SIKKIQDFRS
VFNEQEVPDP YFGGDDGFDY VLDILEDSVS GFLESMS