Gene PMT9312_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1665 
Symbol 
ID3766486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1552200 
End bp1553093 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content30% 
IMG OID637798206 
ProductDNA replication and repair protein RecF 
Protein accessionYP_398162 
Protein GI78780050 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAG TTATAGGACA AATAGATTTT GAAGATGATT TAAAGTTAAA TTTATTCCGA 
AAAGGACCTA AAAGAATTTA TGTCAATGAA TCAATTTTGA AAAAGCAGAG TGAAATAAAG
AATTATATTA GGAGCGTATG TTTCTGTTCT AATGATATAA ATATTGTTAG AAGTGAACCC
AGTTATCGAA GAACATGGAT TGATAAAGTC GTATTTCAAC TTGAACCAGT ATATTTAGAC
TTAATAAGTA GATTTAACAG GCTTTTAAAA CAAAGAAGTC ATTTTTGGCG TTCAGAAAGC
TTCCTAAATA GCCAATCCTC AGATATTTGT GAAAGCTTTG ATATGCAAAT GTCAATAATA
AGTACAAGGA TTTTCAGGCG CAGAAGAAGG GCTTTATTAA AAATAAAACC ATATATTGAA
TATTGGCATA ATCACTTAAG TAAATCTAAA GAGCAAATAG GCATCAATTA TCTTTCTGGG
ATACAAAATA TAAGTCCAGA AGAAGAAGAA GAAGAGGTTA TTAGTAAGAA AATAGCAGAA
CAACTATTAA ATCAGCGTTC AATCGAAGCT TTGACAGGTA AATGTAATTT TGGACCTCAT
CGTGATGATA TTGAGTTTCT AATTAATAAT ATTTCAGTTA GAAAATATGG TTCATCTGGT
CAGCAAAGAA CTTTTATCTT GGCGTTAAAG ATGGCTGAAT TAGATTTTTT AAGTAAAACA
TTAAATGTCT CTCCAATACT GATATTGGAT GATGTCTTAG CGGAACTTGA TATAACTAGA
CAAAATTTGT TATTAAATTC TGTTGGTAAA GATAGTCAAT GCTTTATAAG TGCGACACAT
CTAGATAAAT TTAATCAATC TTTCTTAGGC TCTTCACAAA TGATCTATTT ATAA
 
Protein sequence
MAVVIGQIDF EDDLKLNLFR KGPKRIYVNE SILKKQSEIK NYIRSVCFCS NDINIVRSEP 
SYRRTWIDKV VFQLEPVYLD LISRFNRLLK QRSHFWRSES FLNSQSSDIC ESFDMQMSII
STRIFRRRRR ALLKIKPYIE YWHNHLSKSK EQIGINYLSG IQNISPEEEE EEVISKKIAE
QLLNQRSIEA LTGKCNFGPH RDDIEFLINN ISVRKYGSSG QQRTFILALK MAELDFLSKT
LNVSPILILD DVLAELDITR QNLLLNSVGK DSQCFISATH LDKFNQSFLG SSQMIYL