| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1647 |
|---|
| Symbol | rplB |
|---|
| ID | 3766467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1536346 |
|---|
| End bp | 1537209 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637798187 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_398144 |
|---|
| Protein GI | 78780032 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTC GTAAATTTAA ACCTTATACA CCTGGCACTA GACAGAGAGT AGTTACTGAC
TTTAGTGAAA TAACAAGTGC TAAACCAGAG AGATCACTAA TAGTGTCAAA ACATAGAGTT
AAAGGCAGAA ATAATCGTGG AGTTATTACT TGTCGTCATC GTGGAGGTGG TCACAAAAGA
CAATACAGAT TAGTTGACTT CAGAAGAGAT AAAAGGAACA TTAATGCTAA AGTTGCTGCT
ATTCACTATG ATCCTCATAG AAATGCTAGG CTTGCACTTC TATTTTACGA GGATGGAGAG
AAAAGATACA TTATCGCTCC AGCTGGAGTA AAAGTTGGCC AAAATGTCAT ATCAGGGGAA
AGTGTTCCAA TAGAAGATGG CAATGCAATG CCACTCTCTG TGATGCCTTT AGGATCTAGT
GTGCATTGTG TTGAGTTATA CGCAGGTAGA GGTGCTCAGA TGGTTAGATC TGCAGGAGCT
AGTGCCCAAG TTATGGCAAA AGAGGGAGAT TATGTTGCTT TAAAACTTCC ATCTACTGAG
GTAAGACTTG TTAGAAAAGA ATGCTATGCA ACTCTTGGAG AAGTTGGTAA CTCAGAAATA
AGAAATACTA GCTTAGGTAA AGCAGGAAGA AGAAGATGGC TTGGAAGAAG GCCCCAAGTA
AGAGGAAGTG TAATGAACCC ATGTGATCAC CCACATGGAG GAGGAGAGGG AAAAGCACCA
ATTGGTAGAG CAGGCCCTGT TACTCCATGG GGTAAACCAG CTCTTGGGTT AAAGACACGT
AAAAAGAACA AACCAAGTAA TAAATTAGTA GTTCGAAGGC GTCGTCGCAT TTCTAAGAGG
AGTAGAGGAG GAAGAGACTC TTGA
|
|---|
| Protein sequence | MAIRKFKPYT PGTRQRVVTD FSEITSAKPE RSLIVSKHRV KGRNNRGVIT CRHRGGGHKR
QYRLVDFRRD KRNINAKVAA IHYDPHRNAR LALLFYEDGE KRYIIAPAGV KVGQNVISGE
SVPIEDGNAM PLSVMPLGSS VHCVELYAGR GAQMVRSAGA SAQVMAKEGD YVALKLPSTE
VRLVRKECYA TLGEVGNSEI RNTSLGKAGR RRWLGRRPQV RGSVMNPCDH PHGGGEGKAP
IGRAGPVTPW GKPALGLKTR KKNKPSNKLV VRRRRRISKR SRGGRDS
|
|---|
| |