Gene PMT9312_1625 details

Gene Information

• Locus tag: PMT9312_1625
• Symbol: rplM
• ID: 3766444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 1524491
• End bp: 1524922
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637798164
• Product: 50S ribosomal protein L13
• Protein accession: YP_398121
• Protein GI: 78780009
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.971698
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA CAATTACTCC GTCTTTAGAA ACCATAGAAA GAAATTGGTT TTTAGTCGAC 
GCAAAAGATA AGACACTTGG AAGACTTGCT ACAGAAATTG CAACTGTATT AAGAGGTAAG 
AATAAACCAA CATTTACTCC TCATCTTGAT ACTGGAGATT TTGTCATTGT TGTAAATGCA 
GAAAAAATCG AGGTATCAGG CAAAAAAGCA TCACAAAAGT TGTATAGAAG ACATTCTGGT 
AGACCAGGAG GAATGAAAAC AGAAAAATTT GAGTCTCTCC AAGAGAGGAT TCCTGAAAGA 
ATCATCGAGC AAGCTGTCAA GGGCATGCTG CCTCATAACT CGTTAGGAAG ACAGCAATTT 
AAAAAACTAA AAGTTTATAA AGGTGCTGAT CATCCTCATG CTGCCCAGAA TCCTGTATTA 
TTAAATAGTT AA 

 

Protein sequence

MNKTITPSLE TIERNWFLVD AKDKTLGRLA TEIATVLRGK NKPTFTPHLD TGDFVIVVNA 
EKIEVSGKKA SQKLYRRHSG RPGGMKTEKF ESLQERIPER IIEQAVKGML PHNSLGRQQF 
KKLKVYKGAD HPHAAQNPVL LNS