| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1616 |
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| Symbol | psaA |
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| ID | 3766434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1514630 |
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| End bp | 1516933 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637798154 |
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| Product | photosystem I P700 chlorophyll a apoprotein A1 |
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| Protein accession | YP_398112 |
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| Protein GI | 78780000 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01335] photosystem I core protein PsaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.165391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCA GCCCACCAGA AAGTGGAGAA AAAAACAAGA AAGTTTTGGA AGATCCTGTT
AAGGCCGATC CAAGACCTAT TGATTTTGCC AAATTAGATA AGCCAGGTTT CTGGTCTACT
AAATTATCCA AGGGTCCAAA AACTACAACT TGGATCTGGA ATTTGCATGC AGATGCACAT
GATTTTGATG TGCATACAGG CGATGCTGAA GAAGCAACAA GAAAAATCTT CTCAGCTCAC
TTTGGACATC TTGCAATCAT TTTTATATGG ATGAGTGCTG CTTTTTTCCA TGGAGCAAGA
TTTTCAAATT ACACAGGTTG GTTAGCTGAT CCAACTAATG TTAAACCAGG AGCTCAGCAA
GTTTGGGCTG TTGTCGGCCA AGAGATGCTA AACGGTAATC TTGGTGCGGA CTACAACGGT
ATTCAAATAA GCTCTGGAAT TTTTCATATG TGGAGAGCTT GGGGTATTAC TAACGAAAGT
GAGTTAATGG CTTTGGCTAT TGGTGCAGTA ATAATGGCTG CTCTTATGCT TCATGGAGGT
ATATACCATT ATCATAAAGC TGCTCCAAAA TTGGAATGGT TCCAAAATAT TGAGTCAATG
CTTAATCACC ATATTGCAGG TTTGGTTGGG CTTGGATCAC TAGCTTGGGC TGGACATTGT
ATTCATATTG GAGCGCCAAC AGCTGCACTT CTTGATGCAA TTGACGCTGG ATCACCTTTA
GTTATTAATG GTCAAAAGAT CGCAACAATT GCGGATATGC CAATGCCTCA TCAGCTTTGC
GATCCCCAAA TAATTGGTCA GATCTTTCCT GGTCTAGCTA GTGGAGTTGG TAATTTCTTT
AGTCTTAATT GGTTCGCTTT CTCAGATTTC TTAACTTTTA AAGGTGGTTT GAATCCTGTC
ACTGGAAGTT TATGGATGAC TGATATTGCA CATCATCATT TAGCTTTTGG TGTAATTGCC
ATAATTGGAG GTCATTTATA TAGAACTAAT TATGGAATTG GTTCAAGTAT GAAAGAGATT
TTAGAAGCTC ATCAAGGAGA TCCAATATTA TTCCCAGCAC CAAAAGGTCA TCAAGGTCTT
TTCGAGTTCA TGGCTGAAAG CAGACACGCT CAACTATCTG TAAACCTCGC ATGTCTAGGA
TCTCTTAGCA TCCTGATTTC TCATCATATG TATGCGATGC CTCCATATCC TTACATAGCG
ACTGATTATA TGACTGTTCT TGGTTTATTT ACACATCATA TGTGGATAGG AGCTTTATTT
ATAGTTGGGG CTGGAGCTCA TGCTGGTATA GCCATGGTTA GAGACTATGA TCCAGCAAAA
CATATTGATA ACGTTTTAGA TAGGATTTTA AAAGCTAGAG ATGCCTTAAT AAGTCATCTT
AACTGGGTTT GTATGTGGTT AGGTTTTCAT AGTTTTGGAC TTTATATTCA TAACGACACT
ATGAGAGCTT TAGGTAGACC TCAGGACATG TTTAGTGATA ATGCAATTCA GCTTCAACCA
ATATTTGCGC AATGGGTTCA AAGTATTCAA GCTTCTGCAG TAGGCACTTC AATTTTAGCT
GGTACTCCGG AGGGATTACC TCAAAAAGCT TTAAGTGAAG TCTTTAACGG AAGTTTAGTT
GAAGTAGGTG GAAAGGTAGC CATATCTCCA ATTCAACTTG GAACTGCTGA TTTGATGATC
CATCATATTC ATGCTTTCCA AATACATGTA ACCGTTTTAA TACTCCTTAA AGGAGTACTT
TACGCAAGAA GTTCAAGACT AATTCCAGAT AAAGCTTCTC TTGGATTTAG ATTCCCTTGT
GATGGTCCAG GAAGAGGTGG TACTTGTCAG GTTTCATCAT GGGATCATGT CTTCTTAGCT
CTTTTCTGGA TGTATAACTG CATATCAATA GTTATATTCC ACTTTTCTTG GAAAATGCAA
AGTGATGTGT GGGGACTTAC AGGAGGAAAC TTCTCTCAAA GTGCTATCAC CATTAATGGT
TGGCTAAGAG ATTTCCTATG GGCTCAATCA TCTCAAGTAC TAACAAGTTA CGGTGAAGCT
ATTAGTATGT ATGGATTGAT GTTCTTAGGA GCTCACTTCA TATGGGCGTT TAGTTTGATG
TTCTTATTCA GTGGAAGAGG CTATTGGCAA GAATTATTTG AATCAATAGT ATGGGCTCAT
AACAAGCTTA AAGTTGCCCC AACAATACAA CCAAGAGCAC TTTCAATTAC TCAAGGTAGA
GCCGTTGGTG TAGCTCACTT CCTTCTCGGA GGTATAGCAA CTACTTGGGC TTTCTTCCAT
GCTCGCCTTT TCGGGCTGGG CTAA
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| Protein sequence | MTISPPESGE KNKKVLEDPV KADPRPIDFA KLDKPGFWST KLSKGPKTTT WIWNLHADAH
DFDVHTGDAE EATRKIFSAH FGHLAIIFIW MSAAFFHGAR FSNYTGWLAD PTNVKPGAQQ
VWAVVGQEML NGNLGADYNG IQISSGIFHM WRAWGITNES ELMALAIGAV IMAALMLHGG
IYHYHKAAPK LEWFQNIESM LNHHIAGLVG LGSLAWAGHC IHIGAPTAAL LDAIDAGSPL
VINGQKIATI ADMPMPHQLC DPQIIGQIFP GLASGVGNFF SLNWFAFSDF LTFKGGLNPV
TGSLWMTDIA HHHLAFGVIA IIGGHLYRTN YGIGSSMKEI LEAHQGDPIL FPAPKGHQGL
FEFMAESRHA QLSVNLACLG SLSILISHHM YAMPPYPYIA TDYMTVLGLF THHMWIGALF
IVGAGAHAGI AMVRDYDPAK HIDNVLDRIL KARDALISHL NWVCMWLGFH SFGLYIHNDT
MRALGRPQDM FSDNAIQLQP IFAQWVQSIQ ASAVGTSILA GTPEGLPQKA LSEVFNGSLV
EVGGKVAISP IQLGTADLMI HHIHAFQIHV TVLILLKGVL YARSSRLIPD KASLGFRFPC
DGPGRGGTCQ VSSWDHVFLA LFWMYNCISI VIFHFSWKMQ SDVWGLTGGN FSQSAITING
WLRDFLWAQS SQVLTSYGEA ISMYGLMFLG AHFIWAFSLM FLFSGRGYWQ ELFESIVWAH
NKLKVAPTIQ PRALSITQGR AVGVAHFLLG GIATTWAFFH ARLFGLG
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