| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1599 |
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| Symbol | rpsJ |
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| ID | 3766417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1496518 |
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| End bp | 1496838 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637798137 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_398095 |
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| Protein GI | 78779983 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGCAT CAATTGCACA ACAAAAAATA AGAATAAGAC TAAAAGCATT TGATAGAAGA
ATGCTTGATT TGTCTTGTGA AAAAATAATT CAAACCGCCG ATACTACATC TGCCTCAGCA
ATAGGTCCAA TACCTCTACC TACTAAAAGG AAAATCTATT GTGTTTTGAG GTCACCACAT
GTTGATAAAG ATTCTAGAGA GCATTTCGAA ACAAGAACTC ACCGAAGATT AATAGATATT
TATAGTCCTT CCGCAAAAAC TATTGATGCC TTAATGAAGT TGGATCTTCC TAGTGGTGTA
GATATAGAAG TTAAACTTTA A
|
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| Protein sequence | MTASIAQQKI RIRLKAFDRR MLDLSCEKII QTADTTSASA IGPIPLPTKR KIYCVLRSPH
VDKDSREHFE TRTHRRLIDI YSPSAKTIDA LMKLDLPSGV DIEVKL
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