Gene PMT9312_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1563 
Symbol 
ID3766380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1457224 
End bp1457994 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content26% 
IMG OID637798100 
Productbiotin synthesis protein BioC, putative 
Protein accessionYP_398059 
Protein GI78779947 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA TGGATAATAA AAAGTGGAGT GAGAAAATAA AAAATAATTT CAATGATGCT 
GCATATCGGT ATTTAGAATA TTCAAATATT CAAAAATTTT TTGCATCAAA GATTGTTCAC
TTTATTAAAG AATTAAATCC CCAAACAAAA GGTAAATGGA TAGATCTTGG ATCAGGACCA
GGATTATTAG CTGACGAAAT AGAAAAAGAA TTTTCTTCTC AAAAAGTATG GAGAATTGAT
TTCAGCAAAA AAATGCTTCT TGAGAATAAA TTATCTAGTA AAAGAATTTT ATGGGATTTA
AATAATGATT TACCCTCTGA AATTAATAAC TGTTCTCTAA TAACATCTAA CTTTTGCATA
CATTGGTTAA ACAACCCAGA AAAAATAATA AAAAATTGGT TTAGTAAATT AATGCCTGGT
GGTTTTTTAG TTATTTCATA TCCCACAAAA AATTGTTTCC CTGAATGGAA AGATACTTGT
AGAAAAATTG ATATTGAATA TAGTGGTCTT AGTTTCCTCT ACTACAAAGA ATTGTTAAAA
GATTTCAAGC CAAATGAAAT ACATTATTCA GAAAAGTTTA ATTATCTAGA AAATTTTGAA
GATGTATATA AGCTTTTTAG AAGCCTAATA AATTTAGGAG CACAATCAAC AAACTGTAAA
CGCAAAACAG TGAAAGAGTT AAAAGAAATT CAAAAGTTTT GGCCAAAGAA TTACAATAAT
ACAGTTAACC TTTCATGGGA AATTGATATT CAAATCATAA AGAAATTATG A
 
Protein sequence
MIEMDNKKWS EKIKNNFNDA AYRYLEYSNI QKFFASKIVH FIKELNPQTK GKWIDLGSGP 
GLLADEIEKE FSSQKVWRID FSKKMLLENK LSSKRILWDL NNDLPSEINN CSLITSNFCI
HWLNNPEKII KNWFSKLMPG GFLVISYPTK NCFPEWKDTC RKIDIEYSGL SFLYYKELLK
DFKPNEIHYS EKFNYLENFE DVYKLFRSLI NLGAQSTNCK RKTVKELKEI QKFWPKNYNN
TVNLSWEIDI QIIKKL