Gene PMT9312_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1559 
SymbolfumC 
ID3766376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1451132 
End bp1452517 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content32% 
IMG OID637798096 
Productfumarate hydratase 
Protein accessionYP_398055 
Protein GI78779943 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA ACTTTAGGAT TGAAAAAGAT AGTATGGGAA CTATAAAGGT TCCCATAGAA 
GCTTTGTGGG GAGCTCAAAC ACAAAGATCG ATAATAAATT TTTCTATTGG AGAAGAATTA
ATTCCAATTG AGTTAATTTA TTCACTAACC CTCATAAAAA AAGCTGCTTC AATTGCGAAT
TTCAATTTAG GTTTAATCGA TAAAAGAAAA AAAGATTTGA TTGTAGAGGC ATGTACAGAA
ATACTTGATG GGATTCATGA TTCACAGTTT CCCTTAAAAG TTTGGCAAAC AGGCAGTGGC
ACGCAAACAA ATATGAATGT AAATGAGGTA ATTTCAAATA TTGCAGCATT AAGAACAAAT
TCAGAGCTTG GTAGTCATCA ACCAATTCAT CCGAATGATG ATGTAAATAA ATCTCAGTCA
ACTAATGATA CTTTTCCTGC TGCTATTCAA ATATCTGTTG TTAATGAAAT AATCAAAAAT
TTAGTTCCAA CGATAAGAGA ACTTACGAAG ATCCTTGATA AAAAAAGTGA AGAATGGAAA
GACCTTATAA AGATAGGAAG AACCCATTTT CAAGATGCAG TGCCCCTTAC TTTTGGGCAA
GAAATATCAG GATGGTCAGA GCAACTTAAA GATGCTGAGA ATGCAATTAT TATGAGCCTA
AATGAATTGT ATTTCTTACC TCTGGGAGGA ACTGCAGTTG GTACAGGGAT TAATTGTCCA
AAAGGATTTT GTGAAGAGGC AATAAAATCA ATTTCCGATG ATACTAATCT AATGTTCTAT
AAATCAAAAA ATAATTTTTC TATCATGGCC TCGCATGATC GTCTAGCTCA AGTAATGAGT
CAGATAAAAA TATTAGCAGG TGCATTATTT AAAATTTCAA ATGATATAAA AATTCTATCT
TCTGGTCCAA GATCAGGAAT ATATGAATTA ATTATCCCTC AAAATGAACC TGGAAGTTCT
ATCATGCCGG GCAAAGTGAA TCCGACTCAA TGCGAAGCCT TATCAATGGT TTGCACTCAG
ATAATGGGTC TTGAATATGC AGTTTCAATG GCAAATTCTA GCGGTACTTT ACAGATGAAT
GAATATAAGC CTTTGATTGG ATTTAATATT CTTACAAGTT TAAAATTACT TAAAAATGCA
ATAGAAAACT TTAGAATAAA ATTAGTTGAT GGGATGGAAC CTAATCAAAA GAAAATGAAG
TTAAATTTAG AAAATTCACT AATGTTGGTT ACAGCCATAG TGCCAAAAGT TGGTTATGAA
AAAGCAGCTG AAATTGCAAA CCTTGCCTTC AAAGAATCAC TAAATTTAAA AGAGGCAACA
CTTAAATTAG GTTATTTAAA CGAAGATGAA TTTGATGAAG CAATGAATAT TAATTCAATG
ATTTGA
 
Protein sequence
MTKNFRIEKD SMGTIKVPIE ALWGAQTQRS IINFSIGEEL IPIELIYSLT LIKKAASIAN 
FNLGLIDKRK KDLIVEACTE ILDGIHDSQF PLKVWQTGSG TQTNMNVNEV ISNIAALRTN
SELGSHQPIH PNDDVNKSQS TNDTFPAAIQ ISVVNEIIKN LVPTIRELTK ILDKKSEEWK
DLIKIGRTHF QDAVPLTFGQ EISGWSEQLK DAENAIIMSL NELYFLPLGG TAVGTGINCP
KGFCEEAIKS ISDDTNLMFY KSKNNFSIMA SHDRLAQVMS QIKILAGALF KISNDIKILS
SGPRSGIYEL IIPQNEPGSS IMPGKVNPTQ CEALSMVCTQ IMGLEYAVSM ANSSGTLQMN
EYKPLIGFNI LTSLKLLKNA IENFRIKLVD GMEPNQKKMK LNLENSLMLV TAIVPKVGYE
KAAEIANLAF KESLNLKEAT LKLGYLNEDE FDEAMNINSM I