Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1559 |
Symbol | fumC |
ID | 3766376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1451132 |
End bp | 1452517 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637798096 |
Product | fumarate hydratase |
Protein accession | YP_398055 |
Protein GI | 78779943 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA ACTTTAGGAT TGAAAAAGAT AGTATGGGAA CTATAAAGGT TCCCATAGAA GCTTTGTGGG GAGCTCAAAC ACAAAGATCG ATAATAAATT TTTCTATTGG AGAAGAATTA ATTCCAATTG AGTTAATTTA TTCACTAACC CTCATAAAAA AAGCTGCTTC AATTGCGAAT TTCAATTTAG GTTTAATCGA TAAAAGAAAA AAAGATTTGA TTGTAGAGGC ATGTACAGAA ATACTTGATG GGATTCATGA TTCACAGTTT CCCTTAAAAG TTTGGCAAAC AGGCAGTGGC ACGCAAACAA ATATGAATGT AAATGAGGTA ATTTCAAATA TTGCAGCATT AAGAACAAAT TCAGAGCTTG GTAGTCATCA ACCAATTCAT CCGAATGATG ATGTAAATAA ATCTCAGTCA ACTAATGATA CTTTTCCTGC TGCTATTCAA ATATCTGTTG TTAATGAAAT AATCAAAAAT TTAGTTCCAA CGATAAGAGA ACTTACGAAG ATCCTTGATA AAAAAAGTGA AGAATGGAAA GACCTTATAA AGATAGGAAG AACCCATTTT CAAGATGCAG TGCCCCTTAC TTTTGGGCAA GAAATATCAG GATGGTCAGA GCAACTTAAA GATGCTGAGA ATGCAATTAT TATGAGCCTA AATGAATTGT ATTTCTTACC TCTGGGAGGA ACTGCAGTTG GTACAGGGAT TAATTGTCCA AAAGGATTTT GTGAAGAGGC AATAAAATCA ATTTCCGATG ATACTAATCT AATGTTCTAT AAATCAAAAA ATAATTTTTC TATCATGGCC TCGCATGATC GTCTAGCTCA AGTAATGAGT CAGATAAAAA TATTAGCAGG TGCATTATTT AAAATTTCAA ATGATATAAA AATTCTATCT TCTGGTCCAA GATCAGGAAT ATATGAATTA ATTATCCCTC AAAATGAACC TGGAAGTTCT ATCATGCCGG GCAAAGTGAA TCCGACTCAA TGCGAAGCCT TATCAATGGT TTGCACTCAG ATAATGGGTC TTGAATATGC AGTTTCAATG GCAAATTCTA GCGGTACTTT ACAGATGAAT GAATATAAGC CTTTGATTGG ATTTAATATT CTTACAAGTT TAAAATTACT TAAAAATGCA ATAGAAAACT TTAGAATAAA ATTAGTTGAT GGGATGGAAC CTAATCAAAA GAAAATGAAG TTAAATTTAG AAAATTCACT AATGTTGGTT ACAGCCATAG TGCCAAAAGT TGGTTATGAA AAAGCAGCTG AAATTGCAAA CCTTGCCTTC AAAGAATCAC TAAATTTAAA AGAGGCAACA CTTAAATTAG GTTATTTAAA CGAAGATGAA TTTGATGAAG CAATGAATAT TAATTCAATG ATTTGA
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Protein sequence | MTKNFRIEKD SMGTIKVPIE ALWGAQTQRS IINFSIGEEL IPIELIYSLT LIKKAASIAN FNLGLIDKRK KDLIVEACTE ILDGIHDSQF PLKVWQTGSG TQTNMNVNEV ISNIAALRTN SELGSHQPIH PNDDVNKSQS TNDTFPAAIQ ISVVNEIIKN LVPTIRELTK ILDKKSEEWK DLIKIGRTHF QDAVPLTFGQ EISGWSEQLK DAENAIIMSL NELYFLPLGG TAVGTGINCP KGFCEEAIKS ISDDTNLMFY KSKNNFSIMA SHDRLAQVMS QIKILAGALF KISNDIKILS SGPRSGIYEL IIPQNEPGSS IMPGKVNPTQ CEALSMVCTQ IMGLEYAVSM ANSSGTLQMN EYKPLIGFNI LTSLKLLKNA IENFRIKLVD GMEPNQKKMK LNLENSLMLV TAIVPKVGYE KAAEIANLAF KESLNLKEAT LKLGYLNEDE FDEAMNINSM I
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