Gene PMT9312_1552 details

Gene Information

• Locus tag: PMT9312_1552
• ID: 3766369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1445555
• End bp: 1446211
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637798089
• Product: putative c-type cytochrome biogenesis protein CcdA
• Protein accession: YP_398048
• Protein GI: 78779936
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0785] Cytochrome c biogenesis protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAATG GTCTTAATAG TCCTGGTCCA TTTACTATAT TTTTGGTTTT CAGCGCAGGA 
CTATTAACGA GTCTTGGACC ATGTTCATTA TCATTACTTC CAGTAACAAT TGCTTATATA 
GGAGGAACAG AGAAAAATAA ATTTAAACTT ATTAGTTTTT CAGGAGGAGT AGTTTTTTCG 
CTTGTTGCAC TGGGGGCTGC GAGTGGATTC TTAGGTAAAA TATATGGGCA AATTCCATCT 
TATTACACAT CATTTGTTGC CCTAATAGCA ATAATAATGG GTTTAAATTT ATTAGGAATT 
CTAAAGTTTC AGTTTCCGAA TGGACCCGAT CTAAAAAAAA TAGAAGAAAA AATACCACCC 
CTCTTAGCAC CTTTTACAAT AGGAACTACT TTTGGACTAG CCTCTTCACC TTGCATCACT 
CCAGTTTTAG CTACTCTTTT GGCTTGGGTA TCGCAAGCTA AAAACCCAAT AATCTCAATT 
ATTTTTTTAT TTTTCTTCGG AATAGGCCAA GTCACTCCAT TAATCATTGC GGGAGCCACG 
GCAGAAAACT TAAAAAAATT TTTAGAGCTT AGAAAATTTA GCCAAATAAT TCCCACCTTA 
AGTGGGATAT TTTTAGTTGC CCTAGGATTA TTAAATTTAT TTTCAAATTG GATCTAA 

 

Protein sequence

MQNGLNSPGP FTIFLVFSAG LLTSLGPCSL SLLPVTIAYI GGTEKNKFKL ISFSGGVVFS 
LVALGAASGF LGKIYGQIPS YYTSFVALIA IIMGLNLLGI LKFQFPNGPD LKKIEEKIPP 
LLAPFTIGTT FGLASSPCIT PVLATLLAWV SQAKNPIISI IFLFFFGIGQ VTPLIIAGAT 
AENLKKFLEL RKFSQIIPTL SGIFLVALGL LNLFSNWI