Gene PMT9312_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1466 
Symbol 
ID3766283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1375190 
End bp1375939 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content32% 
IMG OID637798003 
ProductGAF domain-containing protein 
Protein accessionYP_397962 
Protein GI78779850 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.105134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATC TTGTGTCAAA AAAAGAAGAT GAGGAAAGAA GATTAAAATC TTTAGCAGAA 
TATAGAATTT TGGGAACCAA GCCAGAATCA TGTTATGACG ATATTACAAA AATTGCGGCT
GCAACTTGTA ATGTGCCTAT TTCTTTAATG ACTTTGGTTG ACAAAGATAG ACAATGGTTT
AAGTCCAAAG TTGGACTTCA AATATCAGAA ACTAGAAGAG ATTGGTCTTT TTGTACCCAT
GCAATAAAAG AAAATAGTCC ACTAATTATT CATGATGCTT TCCAAGATGA AAGATTTATA
AATAATCCAT TGGTAACAGG AGACCCAAAG ATTCGTTTTT ATGCAGGTTT CCCCCTAAAA
ACTAGTGATG GTAATAAGCT TGGAACTCTT TGTGTAATAG ACAGAAAGCC AGGAAATCTA
ACTACACAAC AATTCAACAT CATGGAATTA TTATCCAGGC AAATAGTTTC ATTCTTAGAG
CTTAGAAAAA AGTCATTAAA CTTGCTAGAT GCATTGTCTA ATTTGCATAA ACAGGAAGGG
ATTTTATCTG TATGTTCATA TTGCAGAGAA GTAAAAAATA AGGAGGGAGA TTGGATGCAT
TTGGAAAAAT ATCTTTCAAA AATTAGTGAT ATTAGATTTA GTCATGGGGT TTGTGATAAT
TGCATGGAAA AACATTTCCC TGATGTAATC GAAGTATGGA ATAAAAAGGA TTTTTTTGAA
GATGGTCAAA AAAGGTATTT AGAGTCTTAG
 
Protein sequence
MQNLVSKKED EERRLKSLAE YRILGTKPES CYDDITKIAA ATCNVPISLM TLVDKDRQWF 
KSKVGLQISE TRRDWSFCTH AIKENSPLII HDAFQDERFI NNPLVTGDPK IRFYAGFPLK
TSDGNKLGTL CVIDRKPGNL TTQQFNIMEL LSRQIVSFLE LRKKSLNLLD ALSNLHKQEG
ILSVCSYCRE VKNKEGDWMH LEKYLSKISD IRFSHGVCDN CMEKHFPDVI EVWNKKDFFE
DGQKRYLES