| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1459 |
|---|
| Symbol | |
|---|
| ID | 3766276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1369920 |
|---|
| End bp | 1370849 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637797996 |
|---|
| Product | short-chain dehydrogenase/reductase |
|---|
| Protein accession | YP_397955 |
|---|
| Protein GI | 78779843 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.392397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCA CTATTTCTAG ACCTACGATT TCTAATTGGG AAACATCTGA TATTCCTAAT
CTTAATGGAA AAACTGCACT TATTACTGGT GCAAATAGTG GCCTTGGATA TTACACGGCA
AAGGCCTTAG CCGAAAAAAA TGCCCATGTA ATCCTGGCAT GTAGATCACT TGAAAAAGCT
AATAAATCTA TTCAAAAGCT TAGAGCTTCA AATCCTGAAG GAATATTTTC TCCACTTGAA
TTAGATTTAT CAGATTTAAA TAATGTTGTT GAAATTCAAC CCAAAATTTT TGATGATTTT
GAAAATCTGG ATTTACTAAT CAATAATGCA GGCATAATGC ACCCGCCTAA AACACTTAGT
GCTCAGGGAT ATGAAATACA ATTTGCAGTT AATCATTTAG CTCATATGCT TTTGACCCTA
AAGCTTCTTC CAATTATTGA AAAAAAAGAG GAGTCGAGAA TAGTAACGGT TACTTCTGGT
GCACAATTTT TTGGCAAAGT TGGCTGGAAA AATCTGAAAG CAGAGAACTA TTACAACAAA
TGGGAATCTT ACTCCAATAG CAAATTGGCA AATGTAATGT TCGCATTGGA ACTAAATGAA
AACTTAAAGC CCAAAAATAT ACTTTCTTTA GCTGCTCACC CAGGGATAGC AAAAACAAAT
CTTTTTACTG CTCAAAAACC TAAACCTAGT CCAATCGAAA CATTCTCCAT GGAATTATTT
AGCCCTATTT TTCAATCCGC TGAGATGGGT GCCTTACCTC AACTTTTTGC AGCTACTTCT
CCAGAGGCAA GAGGCGGAGA TCATTATGGT CCTAAATTTA ATTTCAGAGG TTATCCAAAA
CTATCGCCTA CTTCTCCTGT TGCCATTAAT AAAAAAGAAA GAAAAAATTT ATGGGAAAAA
AGCCTTCAAA TACTGAGTAA TTTCTTATAA
|
|---|
| Protein sequence | MTATISRPTI SNWETSDIPN LNGKTALITG ANSGLGYYTA KALAEKNAHV ILACRSLEKA
NKSIQKLRAS NPEGIFSPLE LDLSDLNNVV EIQPKIFDDF ENLDLLINNA GIMHPPKTLS
AQGYEIQFAV NHLAHMLLTL KLLPIIEKKE ESRIVTVTSG AQFFGKVGWK NLKAENYYNK
WESYSNSKLA NVMFALELNE NLKPKNILSL AAHPGIAKTN LFTAQKPKPS PIETFSMELF
SPIFQSAEMG ALPQLFAATS PEARGGDHYG PKFNFRGYPK LSPTSPVAIN KKERKNLWEK
SLQILSNFL
|
|---|
| |