Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1393 |
Symbol | trpC |
ID | 3766205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1307071 |
End bp | 1307958 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637797926 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_397889 |
Protein GI | 78779777 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATAA GACGCAGGCC ACCAAATCCA ACAGTAAGGG TAGAAAATTT AGAATATGCC GTGCCTCATA GAGAAGCACA AGCAAAAAAT ATTCTAGAAG AAATTGTATG GCACAAGGAT ATTGAAATTA AGAATTTTAA AAAAATAGTT TCTTTAGAAG ATCTCATCAA AAAGATTGAA AACCTTCCAG ATCCCAAAGA TTTTTATAAA AATATCTTGG AGTCAAAAAT AAAACCAGGA TTAATTGCTG AAATAAAAAA AGCTAGTCCG AGTAAAGGAG TTATTAGAAA AGATTTTAAC CCTGAAGACA TAGCAATTTG TTATGAAGAA TTAGGAGCAT CATGTATCTC AGTACTTACC GATAAAAGGT TTTTTCAAGG TAGTTATGAA ATACTCGAAA CTGTAAGGAA ATCAACTAAT CTCCCTCTAC TCTGCAAAGA TTTTATTATT TCTGCTTATC AGATTTATAA AGCAAGGGTA TCTGGTGCTG ATGCAATATT ATTAATCGCT GCGATTTTAA GTGATGACGA TTTAATTTAT CTAAAGAAAA TAGCTGATAA TTTAAAGATG AGCGTTCTTG TTGAAGTCCA TAACGATAAT GAATTAGAAA GGATACTAAA GTTAAAATCT TTTAATTTGA TTGGAATAAA TAATAGGGAC TTAAAGACTT TTAAAACGGA TTTAAAAACA TCGATAGAAT TGATGCATAT ATATGCAGAT ATATTTTTAA AACAAAATAT TCTTCCCATT AGTGAATCTG GAATTAATTG TGCCCAAGAC TTAGAATCGC TTAGATCTAT TGGGATCAAG GGAGTATTAA TTGGTGAAAC TTTTATGAGA GAAAGTGATA TTGAAAAATC TTTCAAGAAA TTATTTAATT CAATTTAA
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Protein sequence | MEIRRRPPNP TVRVENLEYA VPHREAQAKN ILEEIVWHKD IEIKNFKKIV SLEDLIKKIE NLPDPKDFYK NILESKIKPG LIAEIKKASP SKGVIRKDFN PEDIAICYEE LGASCISVLT DKRFFQGSYE ILETVRKSTN LPLLCKDFII SAYQIYKARV SGADAILLIA AILSDDDLIY LKKIADNLKM SVLVEVHNDN ELERILKLKS FNLIGINNRD LKTFKTDLKT SIELMHIYAD IFLKQNILPI SESGINCAQD LESLRSIGIK GVLIGETFMR ESDIEKSFKK LFNSI
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