Gene PMT9312_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1374 
SymbolispF 
ID3766186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1288084 
End bp1288587 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content31% 
IMG OID637797907 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_397870 
Protein GI78779758 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0160663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATT TCACTCCAAA ATTTAGAATT GGTAATGGAT ATGATATTCA TAGATTAGTA 
ACAGGAAGAA AACTTATTAT AGGTGGAGTT AATTTAAAAC ATCCGGATAA TTTGGGGTTA
GATGGTCATA GTGATGCAGA TGTGTTAACT CATTCAATAA TGGATGCATT ATTAGGAGCA
TTGTCTCTAG GAGACATAGG AAAATATTTT CCTCCTTCAG ATGACAAATG GAAAGATGTA
GATAGTCTAA TTTTGTTATC GAAGGTTATT GATTTAGTTA GAAAGCAAGG TTGGGAAATA
AATAATATTG ATAGCGTTCT TGTTGCTGAA AGACCAAAAA TTAAACCATT TGTTGAAATA
ATGAAAAAAA ATCTCTCTAA TACTCTAAAA ATAGATAATA GTTTTATTGG AATAAAAGCA
ACTACGAATG AAAAGTTAGG ACCAGAAGGT AGAGAAGAAG GAATAAGTTG TCACTCTGTA
GTTTTACTCG AGAAAAAAGA ATGA
 
Protein sequence
MNDFTPKFRI GNGYDIHRLV TGRKLIIGGV NLKHPDNLGL DGHSDADVLT HSIMDALLGA 
LSLGDIGKYF PPSDDKWKDV DSLILLSKVI DLVRKQGWEI NNIDSVLVAE RPKIKPFVEI
MKKNLSNTLK IDNSFIGIKA TTNEKLGPEG REEGISCHSV VLLEKKE