Gene PMT9312_1372 details

Gene Information

• Locus tag: PMT9312_1372
• ID: 3766184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 1286988
• End bp: 1287644
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637797905
• Product: putative circadian phase modifier CpmA
• Protein accession: YP_397868
• Protein GI: 78779756
• COG category: [R] General function prediction only
• COG ID: [COG1691] NCAIR mutase (PurE)-related proteins

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00469178
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAG ATATTAGGTT TGATTTTCAA AGAAGGGAAA GGCTTGGACT CATTGAAGCA 
ATTTGGGGAC AAGATAAGAG TATCGATCAA TTAAAGAGAT TATCTGAAAA TGTATTAAGT 
AAAAATGAGG TTGTTTTCAT TACTAGGATT AATAGTGAAA AAGCTATTGA TCTTTTAGAT 
TTTTATGATG ATGCACGATT CTATGAAGAA GCAAAATGCC TGATAATTGG CAAAAATCTA 
AATAAACTTA ATACAAATAA AAAAGTTGCC ATAATTTCAG GCGGTTCTAG TGATTTGCCT 
GTAACACTTG AAGCTCAATT AGCGCTTGAA ATCTATGGAG TTAATTGTCA ATCTTTTATA 
GATGTTGGAG TGGCAGGACT TCATCGATTA ATTAGTCAGT TAGAAGAAAT CAATAAATAC 
GATGTATTAA TAGTTTGTGC TGGGATGGAA GGAGCTTTAG CAACTGTGGT GGGAGGATTG 
TTGGCGCAAC CAATAATCGC AGTACCAGTC TCAGTCGGAT ACGGCGTTAG CAAGAATGGA 
GAAACTGCTT TAAATAGTAT GTTGTCAAGT TGTTCTCCAG GCGTTGCAGT TATGAATATA 
GATAATGGTT ACGGAGCAGC AATGGCAGCT CTAAGGATTA TTAAAAGTAT TTCGTAA 

 

Protein sequence

MNLDIRFDFQ RRERLGLIEA IWGQDKSIDQ LKRLSENVLS KNEVVFITRI NSEKAIDLLD 
FYDDARFYEE AKCLIIGKNL NKLNTNKKVA IISGGSSDLP VTLEAQLALE IYGVNCQSFI 
DVGVAGLHRL ISQLEEINKY DVLIVCAGME GALATVVGGL LAQPIIAVPV SVGYGVSKNG 
ETALNSMLSS CSPGVAVMNI DNGYGAAMAA LRIIKSIS