Gene PMT9312_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1368 
Symbol 
ID3766180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp1285208 
End bp1286305 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content29% 
IMG OID637797901 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_397864 
Protein GI78779752 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.524473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTAA GGTTTTTAAA AACCATAAAA AATAAGTTTC TAATGCAGAA TTCAAGCCCA 
AAAGAACCTG AAGATTTAAG AATTTTTCAA ATTATTGATG CAAATCTTGA TAGAGCTCGA 
GAAGGCTTAA GAGTTCTTGA AGATTGGTCA AGATTTGGGT TAGGGGAGAA TAATTTTGTA 
ACTAAGATAA AAAATTTTAG ACAAATTCTA GGTAAAAATC ATTTAGAAAT TTATAAACAA 
TCCAGGAATT ACAATGAGGA CAAATGTAAA GGGTTGACTC ATCAAGAGCA ACTCAAAAGA 
AAAGCTCCTA AGCAAATAAT AAGTTCCAAT GCAGGCAGAG TGCAAGAAGC TTTAAGAGTG 
ATAGAAGAAT TCTCAAGACT CCATAATCAT GAACTTTCAA AAATCGCTTC AGAAATTAGA 
TATGAAATTT ATAATCTAGA GATTGACTTG TTAAATTTAA GCAAACGTAA AAAGTCGGAT 
GAAATATTAT ACAAAACTCA TTTATATGTA ATAACAGATC AAAAGAAAAA CTTATTAAGA 
ATAATAGAAG ATATCTTAAT TGCAGGGGTA AAAATTATTC AATATAGATT TAAAACAGGA 
ACTGATAAAG ATAATCTTGA AGAAGCGATT CAGATTAAGA ATTTATGTGA AAAATATAAT 
TCATTATTCA TCATTAACGA TAGGGTTGAT ATAGCTATTG CATCAAATGC AGATGGTGTT 
CATCTCGGAC AAGAAGATTT AGACTTAAAA ACTGCAAGAA AATTATTAGG GTATTCAAAA 
ATAATTGGCA TAAGCGCAAA TAATGAAAAT GATATTTCTA ACGCTCTTAA AGAAGGTTGT 
GATTACATAG GAATAGGACC GGTATTTGAA ACTTCAACGA AAAAAAACAA AAAACCTTTA 
GGTATTGAAA AGATCAAAAC ATTAACAAAA GATTTAAATA TTCCTTGGTT TGCTATCGGA 
GGTGTTACGA CAAATAATAT TTCATTTTTA AAAAGCCATG GTTTTAAAAA AGTTGCCTTA 
GTTTCGCAAA TAATGAATTC TGAAGATCCG AAAGAAGACG CTATTATGAT CTTAAAAGAT 
TTGTCTAATG AAAATTAA
 
Protein sequence
MPLRFLKTIK NKFLMQNSSP KEPEDLRIFQ IIDANLDRAR EGLRVLEDWS RFGLGENNFV 
TKIKNFRQIL GKNHLEIYKQ SRNYNEDKCK GLTHQEQLKR KAPKQIISSN AGRVQEALRV 
IEEFSRLHNH ELSKIASEIR YEIYNLEIDL LNLSKRKKSD EILYKTHLYV ITDQKKNLLR 
IIEDILIAGV KIIQYRFKTG TDKDNLEEAI QIKNLCEKYN SLFIINDRVD IAIASNADGV 
HLGQEDLDLK TARKLLGYSK IIGISANNEN DISNALKEGC DYIGIGPVFE TSTKKNKKPL 
GIEKIKTLTK DLNIPWFAIG GVTTNNISFL KSHGFKKVAL VSQIMNSEDP KEDAIMILKD 
LSNEN