Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1332 |
Symbol | |
ID | 3766142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1245822 |
End bp | 1247552 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 637797863 |
Product | ATPase |
Protein accession | YP_397828 |
Protein GI | 78779716 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00148661 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAGTT ATTTAAACAA ATATCAAATC TTTAGGATTT TTAATGAATA TGTATCTCAT ATTCCTAAAA AGAGAAACAA ATTAATAATA TTTTCTTTTG CTCTAATTTT TATAACAGGT TTTTTTGAAT TAATAAATGT TGCTAGTTTA TTGCCTGTTT TAAAAAGTTT TACCGCTTCA GAAGATTTAA ATAATCTACA AATTTATAAC TTTATTTTTC AATTATTTAA TATAAATACT AATAATTCCA AAATAATTTG TACCACATTA ATTTTTATAT TCTTAATTTT AATTTCCAAT ACAATTAAGA TATTAACCTT TTATTTAAAT GCAAGGATTG CAGCAGTAAT TGGTAGTGAT TTGTGTAGTA AGGTTTATCA AAATGCCATT TGCCAACCCT ATTATTATCA TTTGTCAAAA AATACCAATG ATATAATTTC GAATATAATA ACTGGTTCTC AAATAATTGT AAGTGTAGTT AATACAGTCT TAAGAAGTGT TCTATCTATT ATTACTTTTA TATTTGTATT AATTGCTCTT TTTTGGATAA ATGGGAAAAT TGCTATTTTT TCTCTAACTA TATTTAGTTT GATTTATATA ATAATAATGT TTTACTTTAA GACAATATTA AAAAATAAAA GTGCAAAAAT ATATAAAATT AATGTAAAAA TTGTAAAGCT CATACAGGAA AGTTTTGGGA ATATTAAAGA TATAATATTA GACAATTCTC AGAACTTTTT TATAAAAGAT TATCGTCAAG TTGATTTAAT TAAGAGGAAA CAAGAAGCTG AAATTGATTT ACTTGGTAGG CTGCCTTTTT ATTTTATTGA GGCATTGGCT TTGATTTCTA TAGTATTAAT AGGATTATTT CTAGCAGTAT ATTTAAATGA TTCATATATT CTGCCTATTT TAGGATCAAT AGGACTAGGT CTTCAAAGAT TGTTAAGGTC TTTTCAAGAA CTTTATCAGG GATGGGTATT TGTTCAAGGC AGAATTAAAA TATTAACTAG TTTTCTACTT TATTTAAATC TTAAAACTAA TAAATATTTG TTATTCAGTG ATAAGGAAAG GTTTGATTTT CAGAAATCGA TAATTTTGAA AAATGTCTTT TTTAAATATA ATGAGAATTT AATATTAGAA AATTTTAATT TAGAAATAAA TAAAGGAAAA ATTATTGGTA TTAAGGGTAG AACAGGCCGA GGAAAGAGTA CACTAATAAA CTTAATTATG GGTTTGCTTA TACCTACTAA AGGAGAAGTA TTGGTTGATG GAGTAAATAT AAATGCTGTT CAAAATGAAA GGATAAAGAT GAAATATTTT AATTCTATTT CTCATGTATC TCAAGATATT TATTTATCAA ATTTATCATT TGCCGAAAAT ATTGCATTCG GAGTGCCATA CGAACAGATT GATATAAATA GGGTAAAAAA TGCAGCAAAA AAAGCTTTTA TATACGATTT TATTAATTCA ACAATTGATG CTTTTAGGAC AACTGTAGGA GAAAGAGGAA TAAATTTAAG TGGAGGCCAA AAACAAAGGA TAGGTATAGC TAGAGCACTT TATAAAGGTT CTACTATTTT AATTTTAGAT GAAGCTACAA GTTCTCTCGA TTATCATACA GAAGAATTAG TCATTAAAAA TATCCAATCT AATGATAATT GTTTAACAGT TATCATGATT GCTCATCGAT TAAGCACTTT AGATAAGTGT GATTTGATTA TTGAGCTTTA A
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Protein sequence | MYSYLNKYQI FRIFNEYVSH IPKKRNKLII FSFALIFITG FFELINVASL LPVLKSFTAS EDLNNLQIYN FIFQLFNINT NNSKIICTTL IFIFLILISN TIKILTFYLN ARIAAVIGSD LCSKVYQNAI CQPYYYHLSK NTNDIISNII TGSQIIVSVV NTVLRSVLSI ITFIFVLIAL FWINGKIAIF SLTIFSLIYI IIMFYFKTIL KNKSAKIYKI NVKIVKLIQE SFGNIKDIIL DNSQNFFIKD YRQVDLIKRK QEAEIDLLGR LPFYFIEALA LISIVLIGLF LAVYLNDSYI LPILGSIGLG LQRLLRSFQE LYQGWVFVQG RIKILTSFLL YLNLKTNKYL LFSDKERFDF QKSIILKNVF FKYNENLILE NFNLEINKGK IIGIKGRTGR GKSTLINLIM GLLIPTKGEV LVDGVNINAV QNERIKMKYF NSISHVSQDI YLSNLSFAEN IAFGVPYEQI DINRVKNAAK KAFIYDFINS TIDAFRTTVG ERGINLSGGQ KQRIGIARAL YKGSTILILD EATSSLDYHT EELVIKNIQS NDNCLTVIMI AHRLSTLDKC DLIIEL
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