| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1257 |
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| Symbol | |
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| ID | 3766064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 1168885 |
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| End bp | 1170267 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637797785 |
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| Product | photosystem II PsbC protein (CP43) |
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| Protein accession | YP_397752 |
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| Protein GI | 78779640 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0172037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAACGC CCTTTAATAA TTTATTAAGA GCTCCAAACC AAAGTATTGA AGAGACTGGT
TATGCCTGGT ATGTAGGTAA CGCTAGACTA ATCAATTTAT CTGGACGTTT ATTAGGAGCT
CACATCGCTC ACGCTGGACT TATAGTCTTC TGGGCAGGAG CAATGATGCT TTTTGAGGTT
AATCATTTTA CTTTTGATAA ACCAATGTGG GAGCAAGGTC TAATTTGTAT GCCACACGTA
GCAATGTTTG GTTATGGAAT AGGACCTGGT GGTGAAGTTA CTGATATCAT GCCTTTCTTT
CAGGCTGGCG TGGTTCATTT AATAGCTTCT GCAGTGCTTG GCTTTGGTGG AATTTACCAT
TCATTAGCGG GTCCCGAGAA GCTTGAAGAA GCTTTCCCAT TCTTCTCTAC TGACTGGAGA
GATAAAAATC AAATGACCAA TATTCTTGGT TATCATTTGT GTGTTCTTGG TGTAGGTGCA
TTAGCATGGA CTGTGAACTG GTGTTTCATT GGTGGTGCTT ATGATACTTG GGCACCTGGT
GGTGGTGAAG TCAGATTAGT CAATCCAACA TTAGATCCAA GGGTTATTCT TGGTTATCTA
TTTAGATCTC CATGGGGAGG CGCTGGTTCT ATAATCGGTG TTAACTCAAT TGAAGATATT
GTTGGTGGAC ATGTCTATGT GGGTGTAACT GCAATTATTG GAGGAATATT CCACATTTTT
ACCAAACCTT TTGGATGGGC TAGAAGAGCA TTCATCTGGA ACGGTGAAGG TCTATTAAGT
TACGCTCTTG GTGGAATTTG TGTAGCAAGT TTTATTGCAT CAACATTCAT CTGGTTTAAC
AATACTGCTT ACCCATCTGA GTTCTATGGC CCTACAAACG CCGAAGCTTC ACAGGCCCAA
AGCTTTACTT TCCTAGTGAG AGATCAAAGA ATTGGAGCTA ATGTAGGTAC AACAATGGGA
CCAACAGGTT TAGGTAAGTA TCTCATGAGA TCTCCTACAG GTGAAATTAT ATTTGGTGGT
GAAACAATGA GATTTTGGGA TTTCAGAGGT CCATGGTTAG AGCCTTTAAG AGGGCCAAAC
GGATTGAGCC TTGAGAAAAT CCAAAATGAT ATTCAGCCTT GGCAAGTCAG AAGAGCTGCT
GAATATATGA CTCATGCTCC TAATGCTTCT ATCAACTCTG TTGGTGGAAT CATTACTGAG
CCTAATGCTG TTAACTTCGT TAATTTAAGA CAATGGTTAG CTGCAGCTCA ATTCTTCCTA
GGATGGTTTA CATTCATCGG TCATCTTTGG CATGCAGGAC GTGCTAGAGC TGCCGCTGCT
GGTTTCGAAA AAGGAATCGA CAGAAAGAGT GAACCAGCTC TAGAAATGCC AGATTTAGAT
TAA
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| Protein sequence | METPFNNLLR APNQSIEETG YAWYVGNARL INLSGRLLGA HIAHAGLIVF WAGAMMLFEV
NHFTFDKPMW EQGLICMPHV AMFGYGIGPG GEVTDIMPFF QAGVVHLIAS AVLGFGGIYH
SLAGPEKLEE AFPFFSTDWR DKNQMTNILG YHLCVLGVGA LAWTVNWCFI GGAYDTWAPG
GGEVRLVNPT LDPRVILGYL FRSPWGGAGS IIGVNSIEDI VGGHVYVGVT AIIGGIFHIF
TKPFGWARRA FIWNGEGLLS YALGGICVAS FIASTFIWFN NTAYPSEFYG PTNAEASQAQ
SFTFLVRDQR IGANVGTTMG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGPN
GLSLEKIQND IQPWQVRRAA EYMTHAPNAS INSVGGIITE PNAVNFVNLR QWLAAAQFFL
GWFTFIGHLW HAGRARAAAA GFEKGIDRKS EPALEMPDLD
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