| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1235 |
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| Symbol | |
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| ID | 3766042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 1148350 |
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| End bp | 1149411 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637797763 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_397730 |
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| Protein GI | 78779618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.681968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATT TAATAAAAAA AAATATAAAT CTAAGAAGTG GAATTATATT GCTTTCTCTA
GCTATATTTT TCGTTTTTAT AACCAATTCC TTCAAGAAAA ATAAATCAAA AGATATTTCT
GATTTTGTCG TTCAAGTTGA AAAAGGAATC CTCTCAGATT CAATTAATAC AAGTGGTGAA
GTAAAAGCAA TCAGGACAAG CAATATTGGT CCTAGGAAGC AAGGTGTAAT AAAAGAAATT
AAAGTAGAGG AAGGCGATCT TGTAAAAAAA GATCAGGTTT TGGCTTCTCT TGATGATGAA
GATTTCATCT ATAAAATTGA AGAACTTGAA TTAAATATAG AAAAACAAAA ATCTGAATTT
TTAAGAAGAG AATATTTATA TCAAGAAGGT GCAGTAAGCA AAGAAGATTA CGAAAGTTAT
AAAAATAGCT ACGACATTAG TAGCGCCAAA CTTAATGATG CAAAAGCTGA AAAAAGTTTT
TATATAATTA AAGCTCCTTA TGGAGGAAAG ATAACTGCAA AATATGCGGA GATAGGATCT
TATGTCACCC CAAGCACAAA TTTAAGTTCA GACTCTAAAA CGAAAAACTT TATTTTTGAA
CTATCAGAGG GCCTCGAAAT TGTTGCGAAA GTTCCTGAGA GTGACATTGG TAGAATAAAA
ATAGGTCAAG AAGCTTCTGT AAGAATTGAG GCTTATCCAT CAAAAAAATA TACTGCCATA
GTTGAAAAAA TAGCTACAAG AGCTGTAAAA GATAATAATG TTACCTCATT CGAAGTAACT
TTAAATTTTA AAGATATTTC TGAAGAAATA AAAATTGGAA TGACTGCTGA TCTTGAATTT
AGAGTTGAAG GTAATGAAGA AAAAATCCTA GTACCAACAG TTTCTATTGT CACTGAAAAA
GGTGAAAAGG GAATCTTGAA AGTTGATAAA AACAATTCTC CCAAATTTGA AAAAATAGAA
ATTGGTATTA GTAGTGGAAA TAAAACTTCA GTAATTAATG GATTAGAACC TGGAGAGCAA
ATCTTTATTG ATATTCCACC TTGGGCTAAG AAAAGAAAAT GA
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| Protein sequence | MLDLIKKNIN LRSGIILLSL AIFFVFITNS FKKNKSKDIS DFVVQVEKGI LSDSINTSGE
VKAIRTSNIG PRKQGVIKEI KVEEGDLVKK DQVLASLDDE DFIYKIEELE LNIEKQKSEF
LRREYLYQEG AVSKEDYESY KNSYDISSAK LNDAKAEKSF YIIKAPYGGK ITAKYAEIGS
YVTPSTNLSS DSKTKNFIFE LSEGLEIVAK VPESDIGRIK IGQEASVRIE AYPSKKYTAI
VEKIATRAVK DNNVTSFEVT LNFKDISEEI KIGMTADLEF RVEGNEEKIL VPTVSIVTEK
GEKGILKVDK NNSPKFEKIE IGISSGNKTS VINGLEPGEQ IFIDIPPWAK KRK
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