| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1204 |
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| Symbol | |
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| ID | 3766011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1125626 |
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| End bp | 1126348 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637797732 |
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| Product | ribosomal large subunit pseudouridine synthase F |
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| Protein accession | YP_397699 |
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| Protein GI | 78779587 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.501525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACTA GAATAAATAA ATATTTAAGT GAAGTAGGTT ATTGCTCTAG AAGAAAAGCA
GATAGACTGA TTGAAGAAGG AAAAGTAACT ATTAATGGTA AGATTCCTGA AATAGGTGCC
AAGGTGGAGG ATGGTGATCA AGTAGAAGTT GAAGGTCAAA GAATAAAAAA ATCTACGAAA
CAAAAAAACA TATATTTAGC CTTTAATAAA CCTATTGGAG TCGTTTGCAC AACTGATAGG
GGCGTAGAAC CAGACAATAT CATAGATTTC ATTAAATATC CGAAAAGGAT CTTCCCTATT
GGAAGATTAG ATAAGTCTAG TGAGGGGTTG ATTTTTTTAA CCAACGATGG AGATATTGTA
AATAAAATAC TCAGAGCAAG AAATAATCAT GAAAAAGAAT ACATCGTAAG CGTTAATCGT
CCAATTAATA GAGAATTTAT TCAAACCATG AGTAATGGAG TTGAAATACT AGAAACCAAA
ACTAAGAATT GTTTTGTAAA AAAATTAGGG CCAAAAAAAT TTAAAATCAT ACTCACTCAA
GGACTTAACC GTCAGATTAG GAGAATGTGT GAGTCCTTAG GCTACAGAGT ACAATCATTA
AAGCGTGTAA GGATTATGAA TATTAAGCTA GATTTACCAA TAGGAAAATA TCGCGAATTT
ACCAAAGAAG AAATCTCAGA TTTAAATGCA TTACTGAAAA ACTCTTCAAA AATATTTGAA
TAA
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| Protein sequence | MATRINKYLS EVGYCSRRKA DRLIEEGKVT INGKIPEIGA KVEDGDQVEV EGQRIKKSTK
QKNIYLAFNK PIGVVCTTDR GVEPDNIIDF IKYPKRIFPI GRLDKSSEGL IFLTNDGDIV
NKILRARNNH EKEYIVSVNR PINREFIQTM SNGVEILETK TKNCFVKKLG PKKFKIILTQ
GLNRQIRRMC ESLGYRVQSL KRVRIMNIKL DLPIGKYREF TKEEISDLNA LLKNSSKIFE
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