| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1202 |
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| Symbol | |
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| ID | 3766009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 1122591 |
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| End bp | 1124489 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 637797730 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_397697 |
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| Protein GI | 78779585 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCTA ATAAGAATAA TATTGATAAA AGTAAAAATA AACTATTTAA AGATAATGAA
TTTATATCAC AAACAAAAAG AGCGATTCAT TTCGCTAGAT TGGGCAATTT TCATGCATCA
GAAAAGATTT TTAAAGAATT AATTTCTAAA TCTAAATATG ATTACTTAAC TTTACATAGA
TTAGCTGGAA TATCATTAAG ACTTGGGAAG GAGAATCAGT ATCTCTATTA CTTAAAAGAA
ACTATTAAAT GTAAAAAAGA CTATGGAGAA GCATATGCGG AATTAGGGAA TTATTTCACA
AAAGTTGGTC AAATTAATAA TGCATTAAAT TATTTCCATA TGGCAGTTAA TTTCACTCCG
GATTTATATG GGGTTTATAT AAATATTGGA AATATTTTTT CAGATTTAGG AAGAAATGAA
GAAGCATTAA AAAATTATGA AAAAGCATTG AGCATCAAAA ATGACTTTCC ATCAACTTTA
TACAATATCG GTAATATTCT TTTTAACAAG AAAGATTTCA ATGGTGCAGA GAAATATTTT
CTTAAAGCAC TTTCCTTTGA AAAAAATCAT GTTAAATCAA AAATAGGATT AATAAGTATT
TATTCAGAGA CTTTCAATAT AAAATCTCTA AGAAATTTTA AAAGTTTTAT TAAAAATGTT
GGAATAAAAA ATGGTGATGA GATATGTAGG TTAATGACTT TTTTTTACTT AGATAGTTCT
CCACAAAAAC AATATTTAAG AGCACAAAAT TTTTCCAAGA AAGTTTTTGG TGATATTCAA
AAGATTAACA AAATGCCAAT AAAAATAAAC AAGAAAAAAA TTAGAGTTGG TTATATATCA
TCAAATTTTA ATGATCATCC AGTTTTAAAA GTAATGGATT CTATTTTTAA AGGTCATGAT
AAAACTAGCT TTGAAATATA TGCTTATTAC CTTTTTAAAA ATGATGATGA CAATACTAAA
AAAGTAAAGA AATACTTTGA TTCCTTTAAA AATATTGCAT CATTATCCAA TAAAGAAATG
ATAAAAATCA TAAGATCTGA TGAATTAGAT ATAGCAGTTG ATCTTATGGG TTATACAAAT
AGAAATAAGG CGAACATTTT TAATTCAAGG ATAGCTCCTA TACAAATAAA TTATTTGGGA
TTTGCAGGCA CTACATGCAT ACCAAATATG GATTTTTTGA TAGCTGATAA ATTTGTAATT
CCGAAAAAAA ATATGAAATT TTATTCTGAA AAAATTATTT ATATGCCCAA CTGTTTTATT
AACTCAATTA AATATCAATA TTCAAATTCA AAAGAATCAA TAAAATTGAA TTTGCCACCA
AAATCAATTG TACTTGCAGC ATTTCACATG GCATTTAAAT TATCCGAAGA AGTTGTTAAC
AGTTGGATAA AAGTTCTTAA TCAAACAGAA AATACTTATT TATGGTTAAA AATTTCAAAT
AAACTTGCTA AAAAAAATTT AATTTCTCAC TTTCAATCTA AAAATGTTGA TTTAAAAAGA
ATTTTATTTG CTGAAAAGGT TGATCTTTAT ACTGAGCATA TTTCAAGATA TTCAAAAGCA
GATCTCTTTT TAGACACTTT TAACTTTAAT GGTCATTCAA CACTTGTAGA GTGTATATGG
TCCGAACTTC CTTTTATTAC ACTTGCTGGA GAAAGCTTTG CTTCAAGAGT TGGAGCAAGC
ATATTGCATT CTTTAGGGTT GTCAGAACTT ATCGCCAAAT CTACAGATGA ATATATTGAA
AAGGTCATTT TTTATACTAA GAATTCTCAT AAGCTCGCAT TAATTAAGAA TCAAATCAGA
AAACAAAAAA AAGAAGGGGA TTTTTTTAAT CAAAAACTAT TTGTTAATCA ACTGGAAGAA
AAATACAAAA GTTGCATTAA AAGTTTTAAG TCAACTTAA
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| Protein sequence | MESNKNNIDK SKNKLFKDNE FISQTKRAIH FARLGNFHAS EKIFKELISK SKYDYLTLHR
LAGISLRLGK ENQYLYYLKE TIKCKKDYGE AYAELGNYFT KVGQINNALN YFHMAVNFTP
DLYGVYINIG NIFSDLGRNE EALKNYEKAL SIKNDFPSTL YNIGNILFNK KDFNGAEKYF
LKALSFEKNH VKSKIGLISI YSETFNIKSL RNFKSFIKNV GIKNGDEICR LMTFFYLDSS
PQKQYLRAQN FSKKVFGDIQ KINKMPIKIN KKKIRVGYIS SNFNDHPVLK VMDSIFKGHD
KTSFEIYAYY LFKNDDDNTK KVKKYFDSFK NIASLSNKEM IKIIRSDELD IAVDLMGYTN
RNKANIFNSR IAPIQINYLG FAGTTCIPNM DFLIADKFVI PKKNMKFYSE KIIYMPNCFI
NSIKYQYSNS KESIKLNLPP KSIVLAAFHM AFKLSEEVVN SWIKVLNQTE NTYLWLKISN
KLAKKNLISH FQSKNVDLKR ILFAEKVDLY TEHISRYSKA DLFLDTFNFN GHSTLVECIW
SELPFITLAG ESFASRVGAS ILHSLGLSEL IAKSTDEYIE KVIFYTKNSH KLALIKNQIR
KQKKEGDFFN QKLFVNQLEE KYKSCIKSFK ST
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