Gene PMT9312_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1197 
Symbol 
ID3766004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp1117860 
End bp1118444 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content31% 
IMG OID637797725 
Producthypothetical protein 
Protein accessionYP_397692 
Protein GI78779580 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00250603 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA GTGAGTATTT TTATTTAAAA AAAAATTACT CCTCAGGCTT TGGATTGGTT 
GACTCAATTG TAAGTATTTC ATTATTGGGT ATAGTTTTAA GCTACTCGAT TTATTTTGTA 
ACCAAGAGAA TGGATTTATT ATTTAGCTCT AATATAAATA GGTCTATTAA TAAGGAAATT 
AAGAGAGATA TTGATTCGTT GAGATCTGAT ATGTGGGCTA TGGGTCTTGA TACCACTAAA 
AAAAAGTACC TTATTGAACA GAACTCTTGT ATTGACATAT CTGGAAAAAT TTTAGGGTTA 
CCAAATTGGG ATATTAATTC AACTAGACCT GGGTTGAATT CTCCTGCGCC CCCTTCTGGT 
GATGACGAGA GAATTCAATA TTGGTGGCCT GATCAAGAAA AGGGAAAAAT TTTTAAAGGC 
AGAGCAGTTC TTATAGTTAG AGAACTTGTT GTTAAATCAT TCAATAAAAA TAATAATTTA 
GACCAAAATA TCTCAAATAT TAATTATAGG GTCAAATGGA ATGATAATAA TTTGCATTGG 
ATTAGTATTG ATTTGGGAGC TGAGGCTCAC AGTTGGTGTT TCTAA
 
Protein sequence
MQKSEYFYLK KNYSSGFGLV DSIVSISLLG IVLSYSIYFV TKRMDLLFSS NINRSINKEI 
KRDIDSLRSD MWAMGLDTTK KKYLIEQNSC IDISGKILGL PNWDINSTRP GLNSPAPPSG 
DDERIQYWWP DQEKGKIFKG RAVLIVRELV VKSFNKNNNL DQNISNINYR VKWNDNNLHW 
ISIDLGAEAH SWCF