Gene PMT9312_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1170 
Symbol 
ID3765977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1086217 
End bp1086822 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content33% 
IMG OID637797698 
Producthypothetical protein 
Protein accessionYP_397665 
Protein GI78779553 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.215934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGAA AGTTTTTTTT TGTTGCACTA TTAATTTTTC CGCAATATTT AACTTCAGTT 
CAATCATCTG CTTTTAATGA ATCTCAATTA AATAAAATTT CAGATGAATT ATTAATTTCT
GGTTGGAAAC CATTATTAGA TAAAAATATT AAAGATAAAA AAGCTAGTGA TAAGACAATA
AAGGCATTAA ATAAGTTTAA AAACATATCC TCTTTGAAAC CCTACTTTAA AAAAGCTAGA
GGTTACGCTG TTTTCCCAAA TGTAGGAAAA GGAGGAATTG GAATCGGAGG AGCTAGAGGT
AGTGGTGAGG TATTTGAAAA AGGAAATGTT ATTGGAAAAA CCACCTTAAC TCAAGTATCA
ATCGGCTTTC AATTAGGTGG ACAAGCATTT AGCCAAATTA TCTTTTTCAA AGATAAGAAA
TCTCTTGAGA GATTTACTGA AGGTAATTTT GAATTTGGGG CATCAGCTAG TGCAGCATTA
ATTTCAGAGG GAGCTAATGC ATCTGCTGAT TACAGTGATG GAGTTGCAGT TCTTACGTAC
TCAAAAGGAG GCCTTATGTA TGAAGCAAGC ATAGGAGGGC AAAAGTTTAG CTTTGAAGAA
TACTAA
 
Protein sequence
MTRKFFFVAL LIFPQYLTSV QSSAFNESQL NKISDELLIS GWKPLLDKNI KDKKASDKTI 
KALNKFKNIS SLKPYFKKAR GYAVFPNVGK GGIGIGGARG SGEVFEKGNV IGKTTLTQVS
IGFQLGGQAF SQIIFFKDKK SLERFTEGNF EFGASASAAL ISEGANASAD YSDGVAVLTY
SKGGLMYEAS IGGQKFSFEE Y