| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1126 |
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| Symbol | |
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| ID | 3765930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1039902 |
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| End bp | 1041446 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637797651 |
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| Product | putative carotenoid isomerase |
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| Protein accession | YP_397621 |
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| Protein GI | 78779509 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.777729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAA ATAATAGAAA TTTCGATGCA ATTATTATCG GCTCAGGAAT TGGGGGGTTA
GTAACTGCAT CACAATTAGC AGCTAAAGGA GCTCAAGTTT TAGTTCTTGA AAAATATATT
ATTCCAGGAG GAAGTGGAGG ATCCTTTAAA AGAAAAGGTT ATACCTTTGA TGTGGGCGCT
TCAATGATTT TTGGATTTGG AAAGGAAGGT TATACCAATT TATTAACTCG TGCTCTAAAA
GATGTAAATG AGAAATGTGA AACTATTCCT GATCCGGTGC AACTGGAATA TCACCTTCCA
AATAACTTTC ATATTTCTGT AGATAAAAAT TACGAACAAT TTATCAGTAA ATTATCAGCT
AGTTTCCCGA AGGAAAAAGA AGGTATCAAG AAATTCTACG ATACTTGTGC AAGTGTATTT
AAATGTTTAG ATTCAATGCC TCTTTTATCC ATTGAGGATC CAAGTTATCT TTTTAAAGTT
TTCTTTAAAG CTCCATTTTC CTGTTTAGGT TTGGCTAGAT GGTTGCCAGT AAATGCAGGA
GATGTTGCCA GAAAGTTTAT AAAAGATCCT GAACTTTTAA AATTTATAGA TATCGAATGT
TTTTGCTGGT CAGTAATGCC AGCTCTCAAA ACTCCTATGA TTAATGCGGG AATGGTTTTT
ACAGATAGGC ATGCAGGGGG TATAAATTAT CCAAAAGGAG GAGTAGGAAC AATAGCAGAG
AAGTTAGTTG CTGGTATCGA AAAATTAGGA AGTCAAATTC GTTATAAAGC CAATGTTACT
GAAATAATTT TAAAGGATGA GAAAGCGGTA GGAGTTAAGC TTTCAAATGG GGAAGAAATT
TACTCAAATA TTATCGTATC TAATTCCACA AGATGGGATA CATTTGGACT TAAAGATAAG
AAGAAAGGAT TAATTTCAAG TAAAAATGTG CCAAAAAGTG AATATAAGTG GTCTGAGACA
TATCAACCTT CCCCTTCTTT TGTGTCTATT CACCTCGGGG TAGAAAAAAA TCTAATAAGC
AATACCTTTA ACTGTCATCA CATAATTGTC GAGAATTGGG ATGAATTAGA AAGTGAAAAA
GGAGTCATTT TTGTTTCTAT ACCTACTTTG CTGGACTCAT CTTTAGCTCC TGAAGGTAAA
CATATCGTCC ATGCATTTAC TCCTTCATCA ATGAGTGAAT GGGAAGGATT ATCAAGGAAA
GAATATCTGC AAAAGAAAGA AAAATATTTT TCATTTCTTA TTGACAAGAT TTCAATTATT
TTGCCTAACC TTGAACAAAA TATTGATCAC AAAGAAATTG GCACTCCAAA AACCCATAAA
AAGTTTCTTG GAAGATATGA AGGTAGTTAT GGACCAATTC CTAGCAAAAA GTTACTTGGG
CTTTTGCCAA TGCCTTTTAA TACGACAAAA ATTAAAAATC TTTATTGCGT AGGCGATTCG
TGCTTTCCAG GTCAAGGCCT AAATGCTGTA GCTTTTAGTG GGTACGCTTG CGCACATAAA
ATAGGTGCAA AATTAAATAT AAATAGTTTT AAATTACCAA ATTAA
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| Protein sequence | MKSNNRNFDA IIIGSGIGGL VTASQLAAKG AQVLVLEKYI IPGGSGGSFK RKGYTFDVGA
SMIFGFGKEG YTNLLTRALK DVNEKCETIP DPVQLEYHLP NNFHISVDKN YEQFISKLSA
SFPKEKEGIK KFYDTCASVF KCLDSMPLLS IEDPSYLFKV FFKAPFSCLG LARWLPVNAG
DVARKFIKDP ELLKFIDIEC FCWSVMPALK TPMINAGMVF TDRHAGGINY PKGGVGTIAE
KLVAGIEKLG SQIRYKANVT EIILKDEKAV GVKLSNGEEI YSNIIVSNST RWDTFGLKDK
KKGLISSKNV PKSEYKWSET YQPSPSFVSI HLGVEKNLIS NTFNCHHIIV ENWDELESEK
GVIFVSIPTL LDSSLAPEGK HIVHAFTPSS MSEWEGLSRK EYLQKKEKYF SFLIDKISII
LPNLEQNIDH KEIGTPKTHK KFLGRYEGSY GPIPSKKLLG LLPMPFNTTK IKNLYCVGDS
CFPGQGLNAV AFSGYACAHK IGAKLNINSF KLPN
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