Gene PMT9312_1108 details

Gene Information

• Locus tag: PMT9312_1108
• Symbol: recR
• ID: 3765912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 1021002
• End bp: 1021601
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637797633
• Product: recombination protein RecR
• Protein accession: YP_397603
• Protein GI: 78779491
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.425444
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATTACTT ATACCAAACC GCTTTCAAAA TTAATTGGTC ATTTTGAGAA ATTCCCAGGG 
ATTGGTCCAA GAACAGCGCA ACGATTAGCC CTGTTTGTTT TAAAACAACC TGAAAGTACA 
ATAAGAGATT TTTCAAAGGC TCTGTTAGAA GCACATAGTA ATGTTGGTCG TTGCAAAAAA 
TGTTTCAATT TTACTTCAGA AGATGAATGT GAAATTTGTA AAAATACTGA AAGAAATCAA 
AAACTAATCT GTGTAGTAGC AGAAACTAAA GATTTGCTTG CTTTGGAGCG CGCCAGAGAA 
TTTAAAGGTG TTTACCATGT TATTGGTGGT TTAATATCTC CAATGGATTC TGTTGGTCCC 
GAACTCTTAG AAATAAGAAG TTTGGTAGAA AGAGTTAGTA AATCTGAAAT AGATGAGATC 
ATATTGGCAT TGACCCCCAG TGTTGAGGGA GATACAACAA GTCTTTATAT TGGAAAATTG 
TTAGCTCCTT TTACTAAAGT TACGAGGATT GCATATGGCC TACCAATGGG CAGTGAACTT 
GAATATGTAG ATGAAGTTAC ACTTGCAAGG GCGTTAGAAG GAAGAACAAA ACTTAATTAG 

 

Protein sequence

MITYTKPLSK LIGHFEKFPG IGPRTAQRLA LFVLKQPEST IRDFSKALLE AHSNVGRCKK 
CFNFTSEDEC EICKNTERNQ KLICVVAETK DLLALERARE FKGVYHVIGG LISPMDSVGP 
ELLEIRSLVE RVSKSEIDEI ILALTPSVEG DTTSLYIGKL LAPFTKVTRI AYGLPMGSEL 
EYVDEVTLAR ALEGRTKLN