| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1084 |
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| Symbol | |
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| ID | 3765887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 994703 |
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| End bp | 996004 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637797608 |
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| Product | putative glucose 6-phosphate dehydrogenase effector OpcA |
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| Protein accession | YP_397579 |
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| Protein GI | 78779467 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
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| TIGRFAM ID | [TIGR00534] opcA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00820533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTC AACTAACACT CCAAACCCCA TTAGAGCTTC CTTATCAGGA GGTTTCTAAT
TACCTTAATA AGTTATGGAT TTCGGAAGAT AAAGATAATA CAGGAGCTAA TACTTTTACG
TTAATGGTCT GGCAGCCTGC TTGGCTAGAA CAATGTTTGG TACAAAAAGG ATTAGTAAAT
GGACCAATTA CTGGAAACTT AAGTCCAGAG ATAATTGAAG TAGCTAAAAA ATTTATATTA
GATCAAGGAC TTCCTATCAC TACTTCCCTT AATAGTGAAG AATTATTGAA TTTGTTGAAA
GAAGATTTAT CTAATAAAGA CTTTGAAGAC TTTAGAGGAC AATTTTTTGA ATCATCAATA
AGTACATTAA ATCCAAGAAG ATTAATAACT CTAGCGCCAA CGTTAAATAA AAATTCAGAT
ATCAAAACTT TTGTGTCCGC TTACTGTCCA TTAAGTGATA CTCCAGCTAT GCAACCTATA
TGTGGAGATT TAGTTGTTAT TAGGGGAGAC TCTGCCTCAA TAACCCATAA AGGATTAAAA
ATAATTGATC AATTATCTAT TGATCAATTA CCTTCTTGGT TGTGGTGGAA TGGGAGCTTG
GATGAATCGC CTGAAATTTT CGAATATTTT ATTAATTATG GTTTAAGGTT AATAATTGAT
ACTGCGCTTG GATCGCCTAA CAGATGTTTA AAAGTTTTAG ATCAACTAAA GAAATCAAAT
AAAGCTATTA ATGATCTAAA TTGGGTTAGG TTGAAAAATT GGAGGGAATC ATTGGCAATG
ATTTTTGATC CCCCATCGAG GAGACCAATT TTAGATCATA TTTCTGATAT TGATATTGAT
ATCGCAGGAG ATCATATGAT TCAAGCTTTG TTTTTGATCT CATGGATTAG TGATAAACTT
GGTTGGTCTT TTCTAAGAGT TGAAAGGGAT ACAGAATCAA CAAAAATAGA ATTTGAAAGA
ATTAATGGTG AAAAAATTTC TGCATCAATT AATCCTTTAT CTTTGGGAAA TCCAAGTATT
CATTTAGGAC AAGTTATTGG ATTGAGGTTG ATTTCAAGAA TTAGTGATGT TCAAAAAAAC
AACACTTGTG TAATACTTGG ATGTGAATCA GTGGAATGTA TGAGACTTGA AGCAGGGGGA
ATGGCTAATA TGGAATTAAT AGAACAAGTT GTTCCAAATT CTTTTTCTTC ATCAGAGTAT
GATGTTAGTA AATTATTGGG AAGTAGTAGA GGTAATACAA GTCCTCTTTT TGAAAATTCT
ATTAAAATAG CTCTTCAAAT ATTTAATGGT TTTAATAACT AA
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| Protein sequence | MKPQLTLQTP LELPYQEVSN YLNKLWISED KDNTGANTFT LMVWQPAWLE QCLVQKGLVN
GPITGNLSPE IIEVAKKFIL DQGLPITTSL NSEELLNLLK EDLSNKDFED FRGQFFESSI
STLNPRRLIT LAPTLNKNSD IKTFVSAYCP LSDTPAMQPI CGDLVVIRGD SASITHKGLK
IIDQLSIDQL PSWLWWNGSL DESPEIFEYF INYGLRLIID TALGSPNRCL KVLDQLKKSN
KAINDLNWVR LKNWRESLAM IFDPPSRRPI LDHISDIDID IAGDHMIQAL FLISWISDKL
GWSFLRVERD TESTKIEFER INGEKISASI NPLSLGNPSI HLGQVIGLRL ISRISDVQKN
NTCVILGCES VECMRLEAGG MANMELIEQV VPNSFSSSEY DVSKLLGSSR GNTSPLFENS
IKIALQIFNG FNN
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