Gene PMT9312_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1081 
Symbol 
ID3765884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp991916 
End bp992818 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content38% 
IMG OID637797605 
Productpolyprenyl synthetase 
Protein accessionYP_397576 
Protein GI78779464 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.168923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG CTATAAGCAA CATTTCAGAT TTCGAAGAAT ATCTTAAAAA CGCAAAAAAA 
GTTGTAGAAG AAGCGCTTGA TTTCTCCCTA GGCCCTGAAA ATCCTGAAAT ACTTAGAGAG
TCAATGAGAT ATTCTCTTTT AGCTGGAGGG AAAAGAATAC GTCCAATTTT ATGTTTAGCC
TCTTGTTCGC TGGCAGGAGG AGAACCTTCT TTAGCTGTTC CTACGGCTGT AGCTATAGAA
ATGATTCATA CAATGTCTTT AATTCATGAT GATTTGCCCG CTATGGACAA TGATGACTTA
AGAAGAGGTA GGCCAACAAA CCATAAAGTA TATGGAGATG CAATAGCTAT TCTCGCAGGC
GATGCTTTAT TAACTAGAGC CTTTGAAATG GTCTCTTTAA GAAGTCCAGG AGTTGATCCA
ACCAGATTAT TAAATGTAAT TGGTGAACTT TCCTTAGTAG CAGGTGCACC GGGTTTAGTT
GGAGGACAAG TTGTTGATTT AGAATGTGAA GGGAAAGAAG TTGACCTTGA AACCTTAGAG
TATATTCATC TTCACAAGAC TGGGGCTTTA TTGAAAGCTT GCGTAAGAAC AGGCGCGATG
ATCGCAGGAG CTAACGAAGA AACATTACAA GCTCTGACAA CATATGCAGA GGGAATTGGA
TTAGCCTTCC AAATAATAGA TGATATTCTT GATTTAACTT CAAGCAGTGA AAAGCTTGGC
AAAACTGCCG GCAAAGATCT TTTAGCTGAC AAAACTACTT ACCCTAAATT ACTTGGAATG
GAGGAGTCAA AGAAAAGAGC ATTTGATTTA GTAGAAAACG CAAAAAAAGC AATTAAACCT
TGGGGGGCAG ATGCAAAGTA TTTAATATCA TTAGCCGACT TTATTACAAA TAGAGACAGG
TAA
 
Protein sequence
MTEAISNISD FEEYLKNAKK VVEEALDFSL GPENPEILRE SMRYSLLAGG KRIRPILCLA 
SCSLAGGEPS LAVPTAVAIE MIHTMSLIHD DLPAMDNDDL RRGRPTNHKV YGDAIAILAG
DALLTRAFEM VSLRSPGVDP TRLLNVIGEL SLVAGAPGLV GGQVVDLECE GKEVDLETLE
YIHLHKTGAL LKACVRTGAM IAGANEETLQ ALTTYAEGIG LAFQIIDDIL DLTSSSEKLG
KTAGKDLLAD KTTYPKLLGM EESKKRAFDL VENAKKAIKP WGADAKYLIS LADFITNRDR