Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1081 |
Symbol | |
ID | 3765884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 991916 |
End bp | 992818 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637797605 |
Product | polyprenyl synthetase |
Protein accession | YP_397576 |
Protein GI | 78779464 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.168923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAG CTATAAGCAA CATTTCAGAT TTCGAAGAAT ATCTTAAAAA CGCAAAAAAA GTTGTAGAAG AAGCGCTTGA TTTCTCCCTA GGCCCTGAAA ATCCTGAAAT ACTTAGAGAG TCAATGAGAT ATTCTCTTTT AGCTGGAGGG AAAAGAATAC GTCCAATTTT ATGTTTAGCC TCTTGTTCGC TGGCAGGAGG AGAACCTTCT TTAGCTGTTC CTACGGCTGT AGCTATAGAA ATGATTCATA CAATGTCTTT AATTCATGAT GATTTGCCCG CTATGGACAA TGATGACTTA AGAAGAGGTA GGCCAACAAA CCATAAAGTA TATGGAGATG CAATAGCTAT TCTCGCAGGC GATGCTTTAT TAACTAGAGC CTTTGAAATG GTCTCTTTAA GAAGTCCAGG AGTTGATCCA ACCAGATTAT TAAATGTAAT TGGTGAACTT TCCTTAGTAG CAGGTGCACC GGGTTTAGTT GGAGGACAAG TTGTTGATTT AGAATGTGAA GGGAAAGAAG TTGACCTTGA AACCTTAGAG TATATTCATC TTCACAAGAC TGGGGCTTTA TTGAAAGCTT GCGTAAGAAC AGGCGCGATG ATCGCAGGAG CTAACGAAGA AACATTACAA GCTCTGACAA CATATGCAGA GGGAATTGGA TTAGCCTTCC AAATAATAGA TGATATTCTT GATTTAACTT CAAGCAGTGA AAAGCTTGGC AAAACTGCCG GCAAAGATCT TTTAGCTGAC AAAACTACTT ACCCTAAATT ACTTGGAATG GAGGAGTCAA AGAAAAGAGC ATTTGATTTA GTAGAAAACG CAAAAAAAGC AATTAAACCT TGGGGGGCAG ATGCAAAGTA TTTAATATCA TTAGCCGACT TTATTACAAA TAGAGACAGG TAA
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Protein sequence | MTEAISNISD FEEYLKNAKK VVEEALDFSL GPENPEILRE SMRYSLLAGG KRIRPILCLA SCSLAGGEPS LAVPTAVAIE MIHTMSLIHD DLPAMDNDDL RRGRPTNHKV YGDAIAILAG DALLTRAFEM VSLRSPGVDP TRLLNVIGEL SLVAGAPGLV GGQVVDLECE GKEVDLETLE YIHLHKTGAL LKACVRTGAM IAGANEETLQ ALTTYAEGIG LAFQIIDDIL DLTSSSEKLG KTAGKDLLAD KTTYPKLLGM EESKKRAFDL VENAKKAIKP WGADAKYLIS LADFITNRDR
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