| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0997 |
|---|
| Symbol | |
|---|
| ID | 3765801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 926135 |
|---|
| End bp | 926932 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 22% |
|---|
| IMG OID | 637797522 |
|---|
| Product | amphipathic helix repeat-containing protein |
|---|
| Protein accession | YP_397493 |
|---|
| Protein GI | 78779381 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00375349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA ATTTAAGGTT TGAATTGTCC TTTAAAAATA TTTTACAATT AGAAAATAAA
CTTAAGTTTT GCAAATTTAA TGAAATAACA AATATCAACA TTCCATGCAA GGGTAATATT
AAGAAGGAAT TGTTTAATTC CACCATTAAA TATATATCAA AAAACTTCCA AGAATTTAAT
GTAACTTATC ACTATAGTCT TTATCATCAA TACTCTAAAA ATGAAGAAAA ATCATATTAT
GATTTTTTAG ATTTTTTAAA AAACTCTTAT TCAAATAGAA ATTATGAAAT TCTTCTTTTA
TCAGGATCTA ATAAGAAAAA AAACTTTGAT TCTGTTAATG TTTTAAGTAA AATAAAAAAA
GAAAAAGTTG TAAAAATTAA ATTAGGTATA GCTCATAATC CATACTTAAA AAAATATTAT
AAATCGCCTT CAGAAAGAGA TAGGTTTGAG AGGAAAATTT CTACAGGATT AATAAATTCA
GTTTGGTTTC AATATGGCAC AGATATTAAA GTACTTCAGA ATGAAGTGGC TTTTATTAAG
AACAAAGCTA AATATGAAAA ATTAAATCTA TTTGGGAGTT TATTAATTCC TTCAAAACAA
TTTATAGCAA GGTTTAAATT TCGTCCTTGG AAAGGGGTTC ACATATCAGA AAAGTATTTA
TATTCATTAG ATGATTTTAA TGATTTTACA AGAGAGTTAA TTTGTTTTTA TAAATATAAT
AATATTACTC CTCTTATTGA AACTGATTTT TCATCATCAG AAAAACTTGA TTCTCTTAAT
AGTTTTTTTA GAAAATAA
|
|---|
| Protein sequence | MINNLRFELS FKNILQLENK LKFCKFNEIT NINIPCKGNI KKELFNSTIK YISKNFQEFN
VTYHYSLYHQ YSKNEEKSYY DFLDFLKNSY SNRNYEILLL SGSNKKKNFD SVNVLSKIKK
EKVVKIKLGI AHNPYLKKYY KSPSERDRFE RKISTGLINS VWFQYGTDIK VLQNEVAFIK
NKAKYEKLNL FGSLLIPSKQ FIARFKFRPW KGVHISEKYL YSLDDFNDFT RELICFYKYN
NITPLIETDF SSSEKLDSLN SFFRK
|
|---|
| |