Gene PMT9312_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0923 
Symbol 
ID3765725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp858216 
End bp861782 
Gene Length3567 bp 
Protein Length1188 aa 
Translation table11 
GC content31% 
IMG OID637797446 
Productputative methionine synthase 
Protein accessionYP_397419 
Protein GI78779307 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.554379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCTT TCAGAACCTA TCTAAATAGA GATGAAAAAC CATTAATTAT TTTTGACGGA 
GGTACTGGAA CATCTTTTCA GAACTTAAAT CTTACTGCAG ATGACTTTGG AGGAAAAGAA
TTAGAGGGAT GTAATGAAAA CCTTGTTTTA TCATCGCCAG AGGTAGTTGA GAACGTTCAT
AATTCATTTT TAGAAGCAGG TTGTCATGTT ATAGAAACTA ATACATTTGG AGCCTCATCA
ATAGTTCTTG ATGAATATGA TATTGCGGAT AAGGCTTATG AGATAAATAA AAATGCGGCA
TTTATAGCAA AAAAAGCTGC TGACAAATAC TCATCAGTTG ATAAACCAAG GTTTGTAGCA
GGTTCAATTG GGCCAACAAC TAAATTACCC ACCTTAGGAC ATATAGATTT TGATGAATTA
AAGCAATCAT ATAAAGAACA AATTTATGGT CTTATAGATG GAGGAGTTGA TCTTCTTTTG
ATTGAAACTT GTCAGGATGT TTTACAAATT AAATCTGCAT TATTAGCATC AAAAGAAATT
CTCGAAAGTA AAAATATTGA TATACCTTTA ATGGTATCTA TAACAATGGA AACAACAGGT
ACTATGCTTG TTGGATCTGA TATTGCATCT GCATTAACAA TATTAGAGCC ATTTAATATA
GATATCCTTG GACTTAATTG TGCAACTGGT CCAGAGCAAA TGAAGGAACA TATTAAATAT
TTGTCTGAAA ATTCTCCCTT CGCTATAAGC TGTATTCCCA ATGCAGGTCT TCCTGAAAAC
ATTGGTGGTG TAGCTCACTA TAGATTAAAG CCAATAGAAT TAAAGATGCA GTTAATGAAT
TTTATATATG ACTTTAATGT TCAATTAATA GGTGGATGTT GTGGGACAAC ACCTGAACAT
ACAAAATACC TCTCTTCAAT AATAGATGAA ATTATTGATA ATGAAAGGAC TAACAACAAT
GGCAAGAAAA ATTCAAGTGG TTTTATTCCA TCTGCCTCAT CAATATATAA CTCTGTGCCA
TACAAACAAG ACAATTCAAT TTTGATAGTA GGAGAAAGAT TAAATGCAAG TGGATCGAAA
AAGGTAAGGG AGTTATTAAA TAACGACGAT TGGGATGGCT TAGTTGCAAT TGCCAAGCAG
CAACAAAAAG AAAATGCTCA CGTTCTTGAT GTAAATGTCG ATTATGTAGG AAGAGACGGA
GTGAAAGATA TGAAAGAAAT AACATCAAGA CTAGTTACCA ATATAAATTT ACCATTAATG
ATTGACTCTA CAGATGCTGA CAAAATGGAA AGTGGATTAA AGTCAGCTGG TGGTAAATGT
ATTATAAATT CAACCAATTA CGAAGATGGC AATGAAAGGT TTGATCAAGT TCTAAATTTA
GCCTTAGGGT ATGGTTCAGG TCTTGTCGTT GGAACAATTG ATGAAGATGG AATGGCAAGG
AATTCAGAAA AAAAATATAA GATTGTCAAA CGAGCGATTA ATAGAACAAG AGAATGTGGT
TTGTCAGATT ATGAGCTATT TTTTGATCCA TTAGCTCTGC CAATATCTAC AGGGATAGAA
GAAGATAGAT TAAACGCTAA AGAAACTATT AGTGCTATTT TAAAAATTCG TGAAAATTTC
CCAGATATTC ATATCATACT TGGGATATCA AACATTAGTT TTGGTCTTTC ACCATTATCA
AGAATTAATC TAAATTCAAT ATTTTTAGAT GAATGCATTA AAGCAGGATT AGATTCTGCT
ATCATCGCAC CAAATAAAAT TTTGCCATTA TCAAAAATTA CTGAAGAAAC TAAAAAGCTT
TGCTTAGATT TGATTTATGA TAAAAGAGAA TTTGAAGATG ATATTTGTAT TTATGATCCA
TTAGTTGAAT TAACAAAGGC TTTTCAAGAT TTATCCATTC AAGATTTCAA AAAAGCATCT
TCAGATAATA AAAACCAAAC TCTTGAAGAA AGTCTGAAAA ATCATATTAT TGATGGAGAA
AAAATAGGAT TAGAGGATCA ATTAAATAAA GCGTTAAAAA AATATAAACC TCTTGAAATA
ATTAATACCT TTTTATTAGA TGGGATGAAA GTTGTAGGAG ATTTATTTGG CTCAGGTCAA
ATGCAATTGC CATTTGTACT CCAATCCGCT GAAACAATGA AATTTGCTGT TTCAATTTTA
GAACCATATA TGGAAACTGT AGATGAAAAA ATATCAAATG GAAAACTCTT AATTGCAACT
GTCAAAGGCG ATGTACATGA TATTGGAAAA AATTTGGTAG ATATAATACT TACAAATAAT
GGTTATGACG TAATAAATCT AGGAATAAAG CAAGATGTTT CAGCAATTAT AGATGCACAA
AAAAAGCACA ATGCAGATTG CATCGCTATG AGCGGATTAC TTGTTAAATC AACTGCTTTT
ATGAAAGATA ATTTAGAGGC TTTTAACAAT GAAAATATTA GTGTACCAGT AATATTAGGA
GGTGCAGCCT TAACCCCAAA ATTTGTAAAT GAGGACTGCA GCAAAATATA TAAAGGGAAA
ATATTGTACG GAAAAGATGC GTTCACTGAT CTTAAATTCA TGAATGAATA TATGGATAAT
AAGAAAAAGG GTAATTGGTC AAATACAGAG GGTTTCATTA ACAATGAGGG TATAAATATT
AATTTAGCCT CATCAAAATC CAACTCTCAA GCTGTTAAAC AATCAATATC CATACAAACC
GAGACTTCCA AATTAAATTT AAAAGAAAAT TTTATAAGAT CTAAATTTAT AAATGAAGAA
GATCCAATTC AAGCCCCTTT CTTGGGAACG AAAGTCTTGA ACGATGTTGA TATAGATTTA
AATAAGTTAA TATTTTATTT AGATACAAAA GCTCTATTTA GCGGACAATG GCAAATAAAA
AAAGGAAAAA ACCAAAGCGT AGATGAATAC AATAACTATT TGGATTCATA TGCTAAACCA
TTATTAAATA AATGGTTAGA GATAATTATA GAGAAAAAAC TTATATCACC CAAAGCAGTT
TATGGATATT TCAGATGCGG GAGAAAAGAT AATAGTATTT TCTTATTTGA TGAAAAATCA
TTAAATAAAA TTTCCCAATT TAATTTTCCA CGACAAAAAT CTGGGAATAA TTTATGCATA
GCTGATTTTT ATTGCGATTT GAAAAATGAT AAACCGATAG ATATATTTCC TATGCAGGCA
GTAACCATGG GCGATATTGC TAGTGAATAT TCTCAAAAAT TATTTAAAGA AGATAAATAT
AGCGATTATT TGTTATTCCA TGGACTTACA GTGCAATTAG CAGAAGCTCT AGCTGAGTAT
GTCCATGCAT TAATTCGTAT TGAATGTGGA TTTAGGTCTG AAGAACCAGA CAAAAATAGA
GAAATACTAG CTCAAAAATA TAGAGGAGCT AGATATTCTT TTGGTTATCC TGCATGTCCA
AAAGTATCTG ATTCAAACAT ACAATTATCA TTGTTGGATG CAAAAAGAAT AAACTTGACC
ATGGATGAAT CTGAACAACT TCATCCAGAA CAAAGTACTA CAGCTATCAT TTCACTACAC
TCAAAAGCTA AATATTTCAG CGCTTAA
 
Protein sequence
MESFRTYLNR DEKPLIIFDG GTGTSFQNLN LTADDFGGKE LEGCNENLVL SSPEVVENVH 
NSFLEAGCHV IETNTFGASS IVLDEYDIAD KAYEINKNAA FIAKKAADKY SSVDKPRFVA
GSIGPTTKLP TLGHIDFDEL KQSYKEQIYG LIDGGVDLLL IETCQDVLQI KSALLASKEI
LESKNIDIPL MVSITMETTG TMLVGSDIAS ALTILEPFNI DILGLNCATG PEQMKEHIKY
LSENSPFAIS CIPNAGLPEN IGGVAHYRLK PIELKMQLMN FIYDFNVQLI GGCCGTTPEH
TKYLSSIIDE IIDNERTNNN GKKNSSGFIP SASSIYNSVP YKQDNSILIV GERLNASGSK
KVRELLNNDD WDGLVAIAKQ QQKENAHVLD VNVDYVGRDG VKDMKEITSR LVTNINLPLM
IDSTDADKME SGLKSAGGKC IINSTNYEDG NERFDQVLNL ALGYGSGLVV GTIDEDGMAR
NSEKKYKIVK RAINRTRECG LSDYELFFDP LALPISTGIE EDRLNAKETI SAILKIRENF
PDIHIILGIS NISFGLSPLS RINLNSIFLD ECIKAGLDSA IIAPNKILPL SKITEETKKL
CLDLIYDKRE FEDDICIYDP LVELTKAFQD LSIQDFKKAS SDNKNQTLEE SLKNHIIDGE
KIGLEDQLNK ALKKYKPLEI INTFLLDGMK VVGDLFGSGQ MQLPFVLQSA ETMKFAVSIL
EPYMETVDEK ISNGKLLIAT VKGDVHDIGK NLVDIILTNN GYDVINLGIK QDVSAIIDAQ
KKHNADCIAM SGLLVKSTAF MKDNLEAFNN ENISVPVILG GAALTPKFVN EDCSKIYKGK
ILYGKDAFTD LKFMNEYMDN KKKGNWSNTE GFINNEGINI NLASSKSNSQ AVKQSISIQT
ETSKLNLKEN FIRSKFINEE DPIQAPFLGT KVLNDVDIDL NKLIFYLDTK ALFSGQWQIK
KGKNQSVDEY NNYLDSYAKP LLNKWLEIII EKKLISPKAV YGYFRCGRKD NSIFLFDEKS
LNKISQFNFP RQKSGNNLCI ADFYCDLKND KPIDIFPMQA VTMGDIASEY SQKLFKEDKY
SDYLLFHGLT VQLAEALAEY VHALIRIECG FRSEEPDKNR EILAQKYRGA RYSFGYPACP
KVSDSNIQLS LLDAKRINLT MDESEQLHPE QSTTAIISLH SKAKYFSA