Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0923 |
Symbol | |
ID | 3765725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 858216 |
End bp | 861782 |
Gene Length | 3567 bp |
Protein Length | 1188 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637797446 |
Product | putative methionine synthase |
Protein accession | YP_397419 |
Protein GI | 78779307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.554379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCTT TCAGAACCTA TCTAAATAGA GATGAAAAAC CATTAATTAT TTTTGACGGA GGTACTGGAA CATCTTTTCA GAACTTAAAT CTTACTGCAG ATGACTTTGG AGGAAAAGAA TTAGAGGGAT GTAATGAAAA CCTTGTTTTA TCATCGCCAG AGGTAGTTGA GAACGTTCAT AATTCATTTT TAGAAGCAGG TTGTCATGTT ATAGAAACTA ATACATTTGG AGCCTCATCA ATAGTTCTTG ATGAATATGA TATTGCGGAT AAGGCTTATG AGATAAATAA AAATGCGGCA TTTATAGCAA AAAAAGCTGC TGACAAATAC TCATCAGTTG ATAAACCAAG GTTTGTAGCA GGTTCAATTG GGCCAACAAC TAAATTACCC ACCTTAGGAC ATATAGATTT TGATGAATTA AAGCAATCAT ATAAAGAACA AATTTATGGT CTTATAGATG GAGGAGTTGA TCTTCTTTTG ATTGAAACTT GTCAGGATGT TTTACAAATT AAATCTGCAT TATTAGCATC AAAAGAAATT CTCGAAAGTA AAAATATTGA TATACCTTTA ATGGTATCTA TAACAATGGA AACAACAGGT ACTATGCTTG TTGGATCTGA TATTGCATCT GCATTAACAA TATTAGAGCC ATTTAATATA GATATCCTTG GACTTAATTG TGCAACTGGT CCAGAGCAAA TGAAGGAACA TATTAAATAT TTGTCTGAAA ATTCTCCCTT CGCTATAAGC TGTATTCCCA ATGCAGGTCT TCCTGAAAAC ATTGGTGGTG TAGCTCACTA TAGATTAAAG CCAATAGAAT TAAAGATGCA GTTAATGAAT TTTATATATG ACTTTAATGT TCAATTAATA GGTGGATGTT GTGGGACAAC ACCTGAACAT ACAAAATACC TCTCTTCAAT AATAGATGAA ATTATTGATA ATGAAAGGAC TAACAACAAT GGCAAGAAAA ATTCAAGTGG TTTTATTCCA TCTGCCTCAT CAATATATAA CTCTGTGCCA TACAAACAAG ACAATTCAAT TTTGATAGTA GGAGAAAGAT TAAATGCAAG TGGATCGAAA AAGGTAAGGG AGTTATTAAA TAACGACGAT TGGGATGGCT TAGTTGCAAT TGCCAAGCAG CAACAAAAAG AAAATGCTCA CGTTCTTGAT GTAAATGTCG ATTATGTAGG AAGAGACGGA GTGAAAGATA TGAAAGAAAT AACATCAAGA CTAGTTACCA ATATAAATTT ACCATTAATG ATTGACTCTA CAGATGCTGA CAAAATGGAA AGTGGATTAA AGTCAGCTGG TGGTAAATGT ATTATAAATT CAACCAATTA CGAAGATGGC AATGAAAGGT TTGATCAAGT TCTAAATTTA GCCTTAGGGT ATGGTTCAGG TCTTGTCGTT GGAACAATTG ATGAAGATGG AATGGCAAGG AATTCAGAAA AAAAATATAA GATTGTCAAA CGAGCGATTA ATAGAACAAG AGAATGTGGT TTGTCAGATT ATGAGCTATT TTTTGATCCA TTAGCTCTGC CAATATCTAC AGGGATAGAA GAAGATAGAT TAAACGCTAA AGAAACTATT AGTGCTATTT TAAAAATTCG TGAAAATTTC CCAGATATTC ATATCATACT TGGGATATCA AACATTAGTT TTGGTCTTTC ACCATTATCA AGAATTAATC TAAATTCAAT ATTTTTAGAT GAATGCATTA AAGCAGGATT AGATTCTGCT ATCATCGCAC CAAATAAAAT TTTGCCATTA TCAAAAATTA CTGAAGAAAC TAAAAAGCTT TGCTTAGATT TGATTTATGA TAAAAGAGAA TTTGAAGATG ATATTTGTAT TTATGATCCA TTAGTTGAAT TAACAAAGGC TTTTCAAGAT TTATCCATTC AAGATTTCAA AAAAGCATCT TCAGATAATA AAAACCAAAC TCTTGAAGAA AGTCTGAAAA ATCATATTAT TGATGGAGAA AAAATAGGAT TAGAGGATCA ATTAAATAAA GCGTTAAAAA AATATAAACC TCTTGAAATA ATTAATACCT TTTTATTAGA TGGGATGAAA GTTGTAGGAG ATTTATTTGG CTCAGGTCAA ATGCAATTGC CATTTGTACT CCAATCCGCT GAAACAATGA AATTTGCTGT TTCAATTTTA GAACCATATA TGGAAACTGT AGATGAAAAA ATATCAAATG GAAAACTCTT AATTGCAACT GTCAAAGGCG ATGTACATGA TATTGGAAAA AATTTGGTAG ATATAATACT TACAAATAAT GGTTATGACG TAATAAATCT AGGAATAAAG CAAGATGTTT CAGCAATTAT AGATGCACAA AAAAAGCACA ATGCAGATTG CATCGCTATG AGCGGATTAC TTGTTAAATC AACTGCTTTT ATGAAAGATA ATTTAGAGGC TTTTAACAAT GAAAATATTA GTGTACCAGT AATATTAGGA GGTGCAGCCT TAACCCCAAA ATTTGTAAAT GAGGACTGCA GCAAAATATA TAAAGGGAAA ATATTGTACG GAAAAGATGC GTTCACTGAT CTTAAATTCA TGAATGAATA TATGGATAAT AAGAAAAAGG GTAATTGGTC AAATACAGAG GGTTTCATTA ACAATGAGGG TATAAATATT AATTTAGCCT CATCAAAATC CAACTCTCAA GCTGTTAAAC AATCAATATC CATACAAACC GAGACTTCCA AATTAAATTT AAAAGAAAAT TTTATAAGAT CTAAATTTAT AAATGAAGAA GATCCAATTC AAGCCCCTTT CTTGGGAACG AAAGTCTTGA ACGATGTTGA TATAGATTTA AATAAGTTAA TATTTTATTT AGATACAAAA GCTCTATTTA GCGGACAATG GCAAATAAAA AAAGGAAAAA ACCAAAGCGT AGATGAATAC AATAACTATT TGGATTCATA TGCTAAACCA TTATTAAATA AATGGTTAGA GATAATTATA GAGAAAAAAC TTATATCACC CAAAGCAGTT TATGGATATT TCAGATGCGG GAGAAAAGAT AATAGTATTT TCTTATTTGA TGAAAAATCA TTAAATAAAA TTTCCCAATT TAATTTTCCA CGACAAAAAT CTGGGAATAA TTTATGCATA GCTGATTTTT ATTGCGATTT GAAAAATGAT AAACCGATAG ATATATTTCC TATGCAGGCA GTAACCATGG GCGATATTGC TAGTGAATAT TCTCAAAAAT TATTTAAAGA AGATAAATAT AGCGATTATT TGTTATTCCA TGGACTTACA GTGCAATTAG CAGAAGCTCT AGCTGAGTAT GTCCATGCAT TAATTCGTAT TGAATGTGGA TTTAGGTCTG AAGAACCAGA CAAAAATAGA GAAATACTAG CTCAAAAATA TAGAGGAGCT AGATATTCTT TTGGTTATCC TGCATGTCCA AAAGTATCTG ATTCAAACAT ACAATTATCA TTGTTGGATG CAAAAAGAAT AAACTTGACC ATGGATGAAT CTGAACAACT TCATCCAGAA CAAAGTACTA CAGCTATCAT TTCACTACAC TCAAAAGCTA AATATTTCAG CGCTTAA
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Protein sequence | MESFRTYLNR DEKPLIIFDG GTGTSFQNLN LTADDFGGKE LEGCNENLVL SSPEVVENVH NSFLEAGCHV IETNTFGASS IVLDEYDIAD KAYEINKNAA FIAKKAADKY SSVDKPRFVA GSIGPTTKLP TLGHIDFDEL KQSYKEQIYG LIDGGVDLLL IETCQDVLQI KSALLASKEI LESKNIDIPL MVSITMETTG TMLVGSDIAS ALTILEPFNI DILGLNCATG PEQMKEHIKY LSENSPFAIS CIPNAGLPEN IGGVAHYRLK PIELKMQLMN FIYDFNVQLI GGCCGTTPEH TKYLSSIIDE IIDNERTNNN GKKNSSGFIP SASSIYNSVP YKQDNSILIV GERLNASGSK KVRELLNNDD WDGLVAIAKQ QQKENAHVLD VNVDYVGRDG VKDMKEITSR LVTNINLPLM IDSTDADKME SGLKSAGGKC IINSTNYEDG NERFDQVLNL ALGYGSGLVV GTIDEDGMAR NSEKKYKIVK RAINRTRECG LSDYELFFDP LALPISTGIE EDRLNAKETI SAILKIRENF PDIHIILGIS NISFGLSPLS RINLNSIFLD ECIKAGLDSA IIAPNKILPL SKITEETKKL CLDLIYDKRE FEDDICIYDP LVELTKAFQD LSIQDFKKAS SDNKNQTLEE SLKNHIIDGE KIGLEDQLNK ALKKYKPLEI INTFLLDGMK VVGDLFGSGQ MQLPFVLQSA ETMKFAVSIL EPYMETVDEK ISNGKLLIAT VKGDVHDIGK NLVDIILTNN GYDVINLGIK QDVSAIIDAQ KKHNADCIAM SGLLVKSTAF MKDNLEAFNN ENISVPVILG GAALTPKFVN EDCSKIYKGK ILYGKDAFTD LKFMNEYMDN KKKGNWSNTE GFINNEGINI NLASSKSNSQ AVKQSISIQT ETSKLNLKEN FIRSKFINEE DPIQAPFLGT KVLNDVDIDL NKLIFYLDTK ALFSGQWQIK KGKNQSVDEY NNYLDSYAKP LLNKWLEIII EKKLISPKAV YGYFRCGRKD NSIFLFDEKS LNKISQFNFP RQKSGNNLCI ADFYCDLKND KPIDIFPMQA VTMGDIASEY SQKLFKEDKY SDYLLFHGLT VQLAEALAEY VHALIRIECG FRSEEPDKNR EILAQKYRGA RYSFGYPACP KVSDSNIQLS LLDAKRINLT MDESEQLHPE QSTTAIISLH SKAKYFSA
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