Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0851 |
Symbol | |
ID | 3765652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 786272 |
End bp | 787282 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637797373 |
Product | RNA methyltransferase TrmH, group 3 |
Protein accession | YP_397347 |
Protein GI | 78779235 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.367945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT TACCAAAAAA TAATTATTCA AGAAAAAATA GAAAACAGGA CAAAAATAAT TCTGATTCTA ATTTCTACTC AAAAAACACA AATTCATCAA AAAAACATAA TAGATTTCCC ATCCATTCTT CTAAAAATCA AGGGGTTAAC AATTTAGATG AAAGTTATAA AAAGAAAGAT AACTTTTCAT ATTTAAAAAA ATCAAAGCCA ATAAATAAAT CTAATATTAA AGTCTCTTCC AACTCTCAGG ATATTTATCA AGACCTTGCA AATAAAAAAA ATTTTGATGA TTGGATATGG GGGAAACATT CGGTTTTTGA GGCTCTTATT AATCAAAGAG CTATTAACAG GATTTGGTGT ACCTCAGAAA TCTTTTCTTC AGAGAAATTT TATATTTTAC TCAAAGAACT TAAATCAAAA GGTGTCCTTA TTGAAGAAGT TTCTTGGAAT AGGCTTTCGC AATTGACTTT TGGTGCTTCA CATCAAGGTG TCGCGTTGCA ATTAGCATGC TCTAAAACAA TTTCCCTAGA AAAATTAATC GATTTTTCTA AAAGGAACAC TTCAAATCCA ATTATTCTTG CCTTAGACGG AATTACTGAT CCACATAATG TTGGTGCAAT TATAAGATCA GCAGAGGCAT TTGATTGTAA GGGTATAATA ATTCCTCAAA GAAGATCTGC TGGATTAACA GGAACGGTTG CGAAGGTTGC TGCAGGAGCT TTGGAACACT TGCCAGTAAG TAGAGTTGTT AATTTAAATA GGGCATTAGA AGAGCTAAAG AAAAATGGTT TTATGGTTAT TGGATTATCT GGAGATGGTC AATTATCTAT CTCAAAGTTT CATGAAAAGA CTCCCTTGGT AGTAATAGTG GGAGCTGAAG ATAAAGGTAT TTCTTTGCTT ACTCAAAAAA AATGCGATTT TTTATTAAAG ATTCCTCTTA AAGGAAAAAC ATCAAGTTTA AATGCATCTG TTGCAGCCGC AATTTCTCTT TTTCATTTGA CAAATAAATA A
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Protein sequence | MKNLPKNNYS RKNRKQDKNN SDSNFYSKNT NSSKKHNRFP IHSSKNQGVN NLDESYKKKD NFSYLKKSKP INKSNIKVSS NSQDIYQDLA NKKNFDDWIW GKHSVFEALI NQRAINRIWC TSEIFSSEKF YILLKELKSK GVLIEEVSWN RLSQLTFGAS HQGVALQLAC SKTISLEKLI DFSKRNTSNP IILALDGITD PHNVGAIIRS AEAFDCKGII IPQRRSAGLT GTVAKVAAGA LEHLPVSRVV NLNRALEELK KNGFMVIGLS GDGQLSISKF HEKTPLVVIV GAEDKGISLL TQKKCDFLLK IPLKGKTSSL NASVAAAISL FHLTNK
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