Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0561 |
Symbol | |
ID | 3765360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 522505 |
End bp | 524301 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637797081 |
Product | multidrug ABC transporter |
Protein accession | YP_397058 |
Protein GI | 78778946 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.793033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTGA ATGATTTTAG AAGGATTAAA AAGTTAGGTA AATATTTAAC TAAAGATAAA AAAACAATCT ATTTAATCTT AATAGTATTG CTACCGGTTT CATTCTCTGG AGCTATTCAA CCACTATTGG TAGGTCAAGC AATTACTATT CTTAAAAACG AAAGTACAGA TGTTTGGCTA AGTAAAACTT TTTTTGGGCA GTCAATAAAT GCCATAATTT TAACTTTATT TGTGACAGTT ATTTTCAGGT TGATTTTGCA AGGATACCAA ACCTACAATA TCCAAGCGGT GGGACAGAAA TTAACTGCAA GGATAAGGAG AGAACTTTTT GATCATTCAA TATCTTTATC TCTCAAGTAT CACGATAAAA TGCCCGTTGG TAAATTGTTA ACGAGATTAA CCAATGACGT TGATGCTTTA GCCGAGGTTT TTGGTAGTGG AGCAGTTGGA GTAATTGCTG ACTTTGTCAG TCTGATAGTA ATCTCTTTGA CAATGCTTTC AATTGATAGA GGGCTTGCCA TTTTATTGCT ATTAACTCAG ATTCCAGTTT CATATTTCAT TATTTGGCTT CAAAAACGGT ATAGAAGAGC TAATTATCAA GTTAGGGAAG AATTGTCTCA ACTCAACTCT GATTTTCAAG AGAATCTTCA AGGTTTAGAA GTCGTTCAGA TGTTCAGAAG AGAGGCTTTC AATAGCAAGA AATTTTCTAA TACTGGAGTT GCTTACAAGA AAGCAGTAAA TGGAACAATT TTTTATGATA GTAGCATTTC GGCATTTATA GAGTGGATTT CTCTTGCCGC AGTTTCCTTG GTTTTGGCAG TTGGTGGATA TCTTGTTACT TCTGGAAATA TTGGTTTAGG AACATTAACA ACTTTTATTT TATATTCCCA AAGACTTTTT GAACCTTTAA GGCAGCTTGC AGAAAGATTT ACTCAGATAC AAGGAGGTCT AACAGCTGTT GAAAGAATAA ATGAATTATT GGATGAAGAA ATACAGATTA AGGACTCTAT TTCCACAAAA CATTTTTCAG AAAATACTCA AAATGTAAAT AAGCAATTTC AAGGCAAAAT TGAGTTCAAG AATGTTAATT TCTTCTACAA AGAAGGAGAA GATATCATAA AGAATTTATC TTTCATGATC AATCCAGGAG AGCATGTGGC TTTCGTAGGA CCAACTGGTT CAGGTAAAAC AACTATAATT AGATTATTAT GTAGATTGTA TGAACCTCAA TCAGGCCAAA TTTTAATCGA TGATATAGAT ATCAAAGATA TTCCTATCGC AACTCTTAGA AATATGTTGG GAGTGGTTTT GCAAGATACC TTTATCTTTA GTGGAAATGT TGCAGATAAT TTGAAACTAA ATTCGAATAT AGACAATCTT GAATTAGAAA GTCTTTGTAA AGAATTAGGG TTAGATAATT TGTTAAAAAA ATTACCAGAA GGTTTGAACA CCTTTCTGAG AGAAAGAGGG GGGAATCTTT CTTCTGGCGA GAGACAACTT CTTTCAGTAG CTCGAGTAGC GATTAGAAAT CCTGTTGTTT TAATAATGGA CGAAGCTACA GCGTTTATGG ATCCTTCTAC AGAGGCTACT TTGCAGAAAG ATCTTCAGAG AATTCTGTCA AAAAGAACAG CATTAGTAAT AGCTCACAGA CTAGCAACTA TTGAAAATTC TGATAAGATT TTAGTTTTAA AAGCAGGATC ATTAGTTGAA GAGGGAACAC ATAGTGAATT GAGACAGAAA AAGGGTTTAT ATTTTCAGCT CTCTGAGCTT CAACAAAAAG GATTTGCGAA TTTTTAA
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Protein sequence | MFLNDFRRIK KLGKYLTKDK KTIYLILIVL LPVSFSGAIQ PLLVGQAITI LKNESTDVWL SKTFFGQSIN AIILTLFVTV IFRLILQGYQ TYNIQAVGQK LTARIRRELF DHSISLSLKY HDKMPVGKLL TRLTNDVDAL AEVFGSGAVG VIADFVSLIV ISLTMLSIDR GLAILLLLTQ IPVSYFIIWL QKRYRRANYQ VREELSQLNS DFQENLQGLE VVQMFRREAF NSKKFSNTGV AYKKAVNGTI FYDSSISAFI EWISLAAVSL VLAVGGYLVT SGNIGLGTLT TFILYSQRLF EPLRQLAERF TQIQGGLTAV ERINELLDEE IQIKDSISTK HFSENTQNVN KQFQGKIEFK NVNFFYKEGE DIIKNLSFMI NPGEHVAFVG PTGSGKTTII RLLCRLYEPQ SGQILIDDID IKDIPIATLR NMLGVVLQDT FIFSGNVADN LKLNSNIDNL ELESLCKELG LDNLLKKLPE GLNTFLRERG GNLSSGERQL LSVARVAIRN PVVLIMDEAT AFMDPSTEAT LQKDLQRILS KRTALVIAHR LATIENSDKI LVLKAGSLVE EGTHSELRQK KGLYFQLSEL QQKGFANF
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