Gene PMT9312_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0561 
Symbol 
ID3765360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp522505 
End bp524301 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content33% 
IMG OID637797081 
Productmultidrug ABC transporter 
Protein accessionYP_397058 
Protein GI78778946 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.793033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGA ATGATTTTAG AAGGATTAAA AAGTTAGGTA AATATTTAAC TAAAGATAAA 
AAAACAATCT ATTTAATCTT AATAGTATTG CTACCGGTTT CATTCTCTGG AGCTATTCAA
CCACTATTGG TAGGTCAAGC AATTACTATT CTTAAAAACG AAAGTACAGA TGTTTGGCTA
AGTAAAACTT TTTTTGGGCA GTCAATAAAT GCCATAATTT TAACTTTATT TGTGACAGTT
ATTTTCAGGT TGATTTTGCA AGGATACCAA ACCTACAATA TCCAAGCGGT GGGACAGAAA
TTAACTGCAA GGATAAGGAG AGAACTTTTT GATCATTCAA TATCTTTATC TCTCAAGTAT
CACGATAAAA TGCCCGTTGG TAAATTGTTA ACGAGATTAA CCAATGACGT TGATGCTTTA
GCCGAGGTTT TTGGTAGTGG AGCAGTTGGA GTAATTGCTG ACTTTGTCAG TCTGATAGTA
ATCTCTTTGA CAATGCTTTC AATTGATAGA GGGCTTGCCA TTTTATTGCT ATTAACTCAG
ATTCCAGTTT CATATTTCAT TATTTGGCTT CAAAAACGGT ATAGAAGAGC TAATTATCAA
GTTAGGGAAG AATTGTCTCA ACTCAACTCT GATTTTCAAG AGAATCTTCA AGGTTTAGAA
GTCGTTCAGA TGTTCAGAAG AGAGGCTTTC AATAGCAAGA AATTTTCTAA TACTGGAGTT
GCTTACAAGA AAGCAGTAAA TGGAACAATT TTTTATGATA GTAGCATTTC GGCATTTATA
GAGTGGATTT CTCTTGCCGC AGTTTCCTTG GTTTTGGCAG TTGGTGGATA TCTTGTTACT
TCTGGAAATA TTGGTTTAGG AACATTAACA ACTTTTATTT TATATTCCCA AAGACTTTTT
GAACCTTTAA GGCAGCTTGC AGAAAGATTT ACTCAGATAC AAGGAGGTCT AACAGCTGTT
GAAAGAATAA ATGAATTATT GGATGAAGAA ATACAGATTA AGGACTCTAT TTCCACAAAA
CATTTTTCAG AAAATACTCA AAATGTAAAT AAGCAATTTC AAGGCAAAAT TGAGTTCAAG
AATGTTAATT TCTTCTACAA AGAAGGAGAA GATATCATAA AGAATTTATC TTTCATGATC
AATCCAGGAG AGCATGTGGC TTTCGTAGGA CCAACTGGTT CAGGTAAAAC AACTATAATT
AGATTATTAT GTAGATTGTA TGAACCTCAA TCAGGCCAAA TTTTAATCGA TGATATAGAT
ATCAAAGATA TTCCTATCGC AACTCTTAGA AATATGTTGG GAGTGGTTTT GCAAGATACC
TTTATCTTTA GTGGAAATGT TGCAGATAAT TTGAAACTAA ATTCGAATAT AGACAATCTT
GAATTAGAAA GTCTTTGTAA AGAATTAGGG TTAGATAATT TGTTAAAAAA ATTACCAGAA
GGTTTGAACA CCTTTCTGAG AGAAAGAGGG GGGAATCTTT CTTCTGGCGA GAGACAACTT
CTTTCAGTAG CTCGAGTAGC GATTAGAAAT CCTGTTGTTT TAATAATGGA CGAAGCTACA
GCGTTTATGG ATCCTTCTAC AGAGGCTACT TTGCAGAAAG ATCTTCAGAG AATTCTGTCA
AAAAGAACAG CATTAGTAAT AGCTCACAGA CTAGCAACTA TTGAAAATTC TGATAAGATT
TTAGTTTTAA AAGCAGGATC ATTAGTTGAA GAGGGAACAC ATAGTGAATT GAGACAGAAA
AAGGGTTTAT ATTTTCAGCT CTCTGAGCTT CAACAAAAAG GATTTGCGAA TTTTTAA
 
Protein sequence
MFLNDFRRIK KLGKYLTKDK KTIYLILIVL LPVSFSGAIQ PLLVGQAITI LKNESTDVWL 
SKTFFGQSIN AIILTLFVTV IFRLILQGYQ TYNIQAVGQK LTARIRRELF DHSISLSLKY
HDKMPVGKLL TRLTNDVDAL AEVFGSGAVG VIADFVSLIV ISLTMLSIDR GLAILLLLTQ
IPVSYFIIWL QKRYRRANYQ VREELSQLNS DFQENLQGLE VVQMFRREAF NSKKFSNTGV
AYKKAVNGTI FYDSSISAFI EWISLAAVSL VLAVGGYLVT SGNIGLGTLT TFILYSQRLF
EPLRQLAERF TQIQGGLTAV ERINELLDEE IQIKDSISTK HFSENTQNVN KQFQGKIEFK
NVNFFYKEGE DIIKNLSFMI NPGEHVAFVG PTGSGKTTII RLLCRLYEPQ SGQILIDDID
IKDIPIATLR NMLGVVLQDT FIFSGNVADN LKLNSNIDNL ELESLCKELG LDNLLKKLPE
GLNTFLRERG GNLSSGERQL LSVARVAIRN PVVLIMDEAT AFMDPSTEAT LQKDLQRILS
KRTALVIAHR LATIENSDKI LVLKAGSLVE EGTHSELRQK KGLYFQLSEL QQKGFANF